RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 PITX2Q99697 317 aa13.96□□□□□ -0.17
COL2A1-206ENST00000483376 TMUB1Q9BVT8 246 aa13.96□□□□□ -0.17
COL2A1-206ENST00000483376 MS4A5Q9H3V2 200 aa13.96□□□□□ -0.17
COL2A1-206ENST00000483376 MED20Q9H944 212 aa13.96□□□□□ -0.17
COL2A1-206ENST00000483376 CGGBP1Q9UFW8 167 aaPredicted RBP13.96□□□□□ -0.17
COL2A1-206ENST00000483376 GPR160Q9UJ42 338 aa13.96□□□□□ -0.17
COL2A1-206ENST00000483376 ZNF593O00488 134 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-206ENST00000483376 PRKYO43930 277 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 NUDT6P53370 316 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 DSCR9P59020 149 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 PPP1CBP62140 327 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 AADACL4Q5VUY2 407 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 NXNL2Q5VZ03 156 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-206ENST00000483376 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 ZNF454Q8N9F8 522 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 OR10S1Q8NGN2 331 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 ABHD4Q8TB40 342 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 TMEM163Q8TC26 289 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 KLF14Q8TD94 323 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-206ENST00000483376 NEU4Q8WWR8 484 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-206ENST00000483376 C1QTNF5Q9BXJ0 243 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 RAB1BQ9H0U4 201 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 OR51V1Q9H2C8 321 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 MYOZ1Q9NP98 299 aaPredicted RBP13.95□□□□□ -0.18
COL2A1-206ENST00000483376 C8orf4Q9NR00 106 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 ORC6Q9Y5N6 252 aa13.95□□□□□ -0.18
COL2A1-206ENST00000483376 NDUFS7O75251 213 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 NGFP01138 241 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 ERCC1P07992 297 aaPredicted RBP13.94□□□□□ -0.18
COL2A1-206ENST00000483376 SPARCP09486 303 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 CSF3P09919 207 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 ACSM4P0C7M7 580 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 PSKH1P11801 424 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 FOSL1P15407 271 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 LIPAP38571 399 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 ERVS71-1P61550 626 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 GGTLC2Q14390 218 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 LCN1P1Q5VSP4 162 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 DCXRQ7Z4W1 244 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 LRP11Q86VZ4 500 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 OR8J1Q8NGP2 316 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 OTOSQ8NHW6 89 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 SLC25A40Q8TBP6 338 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 TRUB1Q8WWH5 349 aaKnown RBP13.94□□□□□ -0.18
COL2A1-206ENST00000483376 SLC7A6Q92536 515 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 SPTSSAQ969W0 71 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 APOBEC3DQ96AK3 386 aaPredicted RBP13.94□□□□□ -0.18
COL2A1-206ENST00000483376 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 RDH12Q96NR8 316 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 SORCS2Q96PQ0 1159 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 TEAD3Q99594 435 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 SYT3Q9BQG1 590 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 OR2J1Q9GZK6 312 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 TOR3AQ9H497 397 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 DYNLRB1Q9NP97 96 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 DLL4Q9NR61 685 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 HAO2Q9NYQ3 351 aa13.94□□□□□ -0.18
COL2A1-206ENST00000483376 FLNAP21333 2647 aaKnown RBP13.94□□□□□ -0.18
COL2A1-206ENST00000483376 CCDC182A6NF36 153 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 SLC22A31A6NKX4 558 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 ZNF878C9JN71 531 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 TLX2O43763 284 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-206ENST00000483376 DBHP09172 617 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 KITLGP21583 273 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 GCH1P30793 250 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 POLR2IP36954 125 aaKnown RBP13.93□□□□□ -0.18
COL2A1-206ENST00000483376 RPS27P42677 84 aaKnown RBP13.93□□□□□ -0.18
COL2A1-206ENST00000483376 TPTEP56180 551 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 FBXW12Q6X9E4 464 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 ZBTB49Q6ZSB9 765 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 DPY19L4Q7Z388 723 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 ERI1Q8IV48 349 aaKnown RBP13.93□□□□□ -0.18
COL2A1-206ENST00000483376 GID4Q8IVV7 300 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 BBS1Q8NFJ9 593 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 OR5L1Q8NGL2 311 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 OR6N2Q8NGY6 317 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 RNF133Q8WVZ7 376 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 OTULINQ96BN8 352 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 SLAMF6Q96DU3 332 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 ZMYND19Q96E35 227 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-206ENST00000483376 RIBC2Q9H4K1 309 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 CYSLTR2Q9NS75 346 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 NKIRAS2Q9NYR9 191 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 MYEF2Q9P2K5 600 aaKnown RBP13.93□□□□□ -0.18
COL2A1-206ENST00000483376 DUSP13Q9UII6 198 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 GRIP1Q9Y3R0 1128 aa13.93□□□□□ -0.18
COL2A1-206ENST00000483376 A0A1W2PPW3 197 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 M0R135 149 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 CLPTM1O96005 669 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 MT-ND5P03915 603 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 ADH4P08319 380 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 RAC2P15153 192 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 SLC15A1P46059 708 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 MMP15P51511 669 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 CDC42P60953 191 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 GRB2P62993 217 aaKnown RBP13.92□□□□□ -0.18
COL2A1-206ENST00000483376 TMED1Q13445 227 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 APOFQ13790 326 aa13.92□□□□□ -0.18
COL2A1-206ENST00000483376 CLEC12BQ2HXU8 276 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms