RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 MEP1BQ16820 701 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 CCDC92Q53HC0 331 aaPredicted RBP11.63□□□□□ -0.55
VARS-226ENST00000483275 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 ERICH5Q6P6B1 374 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 CPLX4Q7Z7G2 160 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 C1orf174Q8IYL3 243 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 POU5F2Q8N7G0 328 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 OR2T12Q8NG77 320 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 TMIGD2Q96BF3 282 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 HAVCR1Q96D42 359 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 FAM46AQ96IP4 442 aaKnown RBP11.63□□□□□ -0.55
VARS-226ENST00000483275 SH3GL1Q99961 368 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 SYT4Q9H2B2 425 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 MARCH7Q9H992 704 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 ZMAT3Q9HA38 289 aaKnown RBP11.63□□□□□ -0.55
VARS-226ENST00000483275 SAR1AQ9NR31 198 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 GRHPRQ9UBQ7 328 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 LRCH1Q9Y2L9 728 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 COA3Q9Y2R0 106 aaPredicted RBP11.63□□□□□ -0.55
VARS-226ENST00000483275 POLR1DQ9Y2S0 133 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 CAPN7Q9Y6W3 813 aa11.63□□□□□ -0.55
VARS-226ENST00000483275 A0A087WUU8 490 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 LOC100653049A0A140TA62 436 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 PRSS37A4D1T9 235 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 SOCS2O14508 198 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 XKRYO14609 159 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 SLC22A2O15244 555 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 SLC16A7O60669 478 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 KRT34O76011 436 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 PLATP00750 562 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 HLA-DPB1P04440 258 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 COX5BP10606 129 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 PMELP40967 661 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 AQP6Q13520 282 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 DEFB112Q30KQ8 113 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 CORO6Q6QEF8 472 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 PTCHD4Q6ZW05 846 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 FAM122BQ7Z309 247 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 SYT9Q86SS6 491 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 MUC20Q8N307 709 aaPredicted RBP11.62□□□□□ -0.55
VARS-226ENST00000483275 PCYOX1LQ8NBM8 494 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 OR1F12Q8NHA8 337 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 FNDC8Q8TC99 324 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 UPRTQ96BW1 309 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 TSSK2Q96PF2 358 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 ELAC2Q9BQ52 826 aaKnown RBP11.62□□□□□ -0.55
VARS-226ENST00000483275 CDADC1Q9BWV3 514 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 FAM107BQ9H098 131 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 TMEM165Q9HC07 324 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 GID8Q9NWU2 228 aa11.62□□□□□ -0.55
VARS-226ENST00000483275 ELOVL7A1L3X0 281 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 FAM181BA6NEQ2 426 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 SURF4O15260 269 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 IFNW1P05000 195 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 CD14P08571 375 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 RAC2P15153 192 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 PITPNBP48739 271 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 CENPAP49450 140 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 FGF12P61328 243 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 GNGT1P63211 74 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 SELENOWP63302 87 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 COQ5Q5HYK3 327 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 SLC27A4Q6P1M0 643 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 BTNL3Q6UXE8 466 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 MBOAT2Q6ZWT7 520 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 ACOT11Q8WXI4 607 aaPredicted RBP11.61□□□□□ -0.55
VARS-226ENST00000483275 DACT3Q96B18 629 aaPredicted RBP11.61□□□□□ -0.55
VARS-226ENST00000483275 RCN3Q96D15 328 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 HSH2DQ96JZ2 352 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 CMTM6Q9NX76 183 aa11.61□□□□□ -0.55
VARS-226ENST00000483275 PDP1Q9P0J1 537 aaPredicted RBP11.61□□□□□ -0.55
VARS-226ENST00000483275 C22orf46C9J442 243 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 CLDN34H7C241 214 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 DCTN6O00399 190 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 NPPAP01160 153 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 SFTPBP07988 381 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 MTNR1AP48039 350 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 PRAMEF6Q5VXH4 476 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 LRRN1Q6UXK5 716 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 C9orf139Q6ZV77 190 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 TSEN54Q7Z6J9 526 aaKnown RBP11.6□□□□□ -0.55
VARS-226ENST00000483275 GLB1L2Q8IW92 636 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 KIR3DL3Q8N743 410 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 OR8G5Q8NG78 346 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 WFDC12Q8WWY7 111 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 RAB40AQ8WXH6 277 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 NEIL1Q96FI4 390 aaPredicted RBP11.6□□□□□ -0.55
VARS-226ENST00000483275 NUDT16L1Q9BRJ7 211 aaKnown RBP11.6□□□□□ -0.55
VARS-226ENST00000483275 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 UFSP2Q9NUQ7 469 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 ARMCX1Q9P291 453 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 LHFPL6Q9Y693 200 aa11.6□□□□□ -0.55
VARS-226ENST00000483275 KHDRBS3O75525 346 aaKnown RBP11.59□□□□□ -0.55
VARS-226ENST00000483275 IFNA8P32881 189 aa11.59□□□□□ -0.55
VARS-226ENST00000483275 FXYD6P3P58550 94 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms