RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PTP4A1Q93096 173 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 APOBEC3DQ96AK3 386 aaPredicted RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 COQ7Q99807 217 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 TRIM15Q9C019 465 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 FN3KQ9H479 309 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 EGLN3Q9H6Z9 239 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 ZNF665Q9H7R5 613 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 PRPF19Q9UMS4 504 aaKnown RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 PCDHB10Q9UN67 800 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 SAMHD1Q9Y3Z3 626 aaKnown RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 WIPI2Q9Y4P8 454 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 LYVE1Q9Y5Y7 322 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 CDH10Q9Y6N8 788 aa13.04□□□□□ -0.32
CDK9-203ENST00000480353 ANK3Q12955 4377 aaKnown RBP13.04□□□□□ -0.32
CDK9-203ENST00000480353 TANC2Q9HCD6 1990 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 DYSFO75923 2080 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 FAM157AC9JC47 383 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 J3QW42 95 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 DCTN6O00399 190 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 GNGT2O14610 69 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 WNT9BO14905 357 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 DBHP09172 617 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 LIPNQ5VXI9 398 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 LCN8Q6JVE9 175 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 FAHD2BQ6P2I3 314 aaPredicted RBP13.03□□□□□ -0.32
CDK9-203ENST00000480353 CORO6Q6QEF8 472 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 OR5AS1Q8N127 324 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 OR6V1Q8N148 313 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 ATG16L2Q8NAA4 619 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 AQP11Q8NBQ7 271 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 FAHD2AQ96GK7 314 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 HCAR1Q9BXC0 346 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 POFUT1Q9H488 388 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 UBAP1Q9NZ09 502 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 LHFPL6Q9Y693 200 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 CACNG2Q9Y698 323 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 U3KQV3 271 aa13.03□□□□□ -0.32
CDK9-203ENST00000480353 IGLV1-36A0A0B4J1U3 117 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 F5H5K5 113 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 ADH4P08319 380 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 RAC2P15153 192 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 KITLGP21583 273 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 THBS2P35442 1172 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 COX10Q12887 443 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 ECH1Q13011 328 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 MALLQ13021 153 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 OR2T5Q6IEZ7 315 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 SLC27A4Q6P1M0 643 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 OR2T29Q8NH02 315 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 HAVCR1Q96D42 359 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 ZNF582Q96NG8 517 aaPredicted RBP13.02□□□□□ -0.33
CDK9-203ENST00000480353 ATF6BQ99941 703 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
CDK9-203ENST00000480353 OR6C68A6NDL8 312 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 GASTP01350 101 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 IFNGP01579 166 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 CD55P08174 381 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 SELEP16581 610 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 HMGA2P52926 109 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 TPTEP56180 551 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 LMO4P61968 165 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 PPP1R8Q12972 351 aaKnown RBP13.01□□□□□ -0.33
CDK9-203ENST00000480353 CDK5R2Q13319 367 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 HLXQ14774 488 aaPredicted RBP13.01□□□□□ -0.33
CDK9-203ENST00000480353 TAF13Q15543 124 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 RASSF6Q6ZTQ3 369 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 ZBTB46Q86UZ6 589 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 SPTSSAQ969W0 71 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 ASB9Q96DX5 294 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 THTPAQ9BU02 230 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 TSSK6Q9BXA6 273 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 KCNG2Q9UJ96 466 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 KLHL21Q9UJP4 597 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 BAIAP2Q9UQB8 552 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 PPP1R3CQ9UQK1 317 aa13.01□□□□□ -0.33
CDK9-203ENST00000480353 A0A0G2JMP0 313 aa13□□□□□ -0.33
CDK9-203ENST00000480353 A0A0X1KG70 313 aa13□□□□□ -0.33
CDK9-203ENST00000480353 TCRBV5S2A0A599 114 aa13□□□□□ -0.33
CDK9-203ENST00000480353 TCF21O43680 179 aa13□□□□□ -0.33
CDK9-203ENST00000480353 UBOX5O94941 541 aa13□□□□□ -0.33
CDK9-203ENST00000480353 PNPP00491 289 aa13□□□□□ -0.33
CDK9-203ENST00000480353 CST1P01037 141 aa13□□□□□ -0.33
CDK9-203ENST00000480353 LCATP04180 440 aa13□□□□□ -0.33
CDK9-203ENST00000480353 SBK2P0C263 348 aa13□□□□□ -0.33
CDK9-203ENST00000480353 RAP2AP10114 183 aa13□□□□□ -0.33
CDK9-203ENST00000480353 PYCR1P32322 319 aa13□□□□□ -0.33
CDK9-203ENST00000480353 MAGEA2P43356 314 aa13□□□□□ -0.33
CDK9-203ENST00000480353 SLC6A9P48067 706 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms