RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ZNF878C9JN71 531 aa17■□□□□ 0.31
LIME1-205ENST00000480139 H0YJX3 145 aa17■□□□□ 0.31
LIME1-205ENST00000480139 GPRIN2O60269 458 aa17■□□□□ 0.31
LIME1-205ENST00000480139 CD8AP01732 235 aa17■□□□□ 0.31
LIME1-205ENST00000480139 OR4A8P0C604 315 aa17■□□□□ 0.31
LIME1-205ENST00000480139 FAM157BP0CG42 384 aa17■□□□□ 0.31
LIME1-205ENST00000480139 GABRB1P18505 474 aa17■□□□□ 0.31
LIME1-205ENST00000480139 TUBG1P23258 451 aa17■□□□□ 0.31
LIME1-205ENST00000480139 OTX1P32242 354 aaPredicted RBP17■□□□□ 0.31
LIME1-205ENST00000480139 SERPINF1P36955 418 aa17■□□□□ 0.31
LIME1-205ENST00000480139 RGS6P49758 472 aa17■□□□□ 0.31
LIME1-205ENST00000480139 NUDT6P53370 316 aa17■□□□□ 0.31
LIME1-205ENST00000480139 POU4F2Q12837 409 aa17■□□□□ 0.31
LIME1-205ENST00000480139 EIF2B1Q14232 305 aaKnown RBP17■□□□□ 0.31
LIME1-205ENST00000480139 RSPO1Q2MKA7 263 aaPredicted RBP17■□□□□ 0.31
LIME1-205ENST00000480139 TMEM154Q6P9G4 183 aa17■□□□□ 0.31
LIME1-205ENST00000480139 ENTHD1Q8IYW4 607 aa17■□□□□ 0.31
LIME1-205ENST00000480139 ZNF101Q8IZC7 436 aa17■□□□□ 0.31
LIME1-205ENST00000480139 RNF133Q8WVZ7 376 aa17■□□□□ 0.31
LIME1-205ENST00000480139 UBE2FQ969M7 185 aa17■□□□□ 0.31
LIME1-205ENST00000480139 SLAMF6Q96DU3 332 aa17■□□□□ 0.31
LIME1-205ENST00000480139 CNN2Q99439 309 aaKnown RBP17■□□□□ 0.31
LIME1-205ENST00000480139 MNTQ99583 582 aa17■□□□□ 0.31
LIME1-205ENST00000480139 ABHD6Q9BV23 337 aa17■□□□□ 0.31
LIME1-205ENST00000480139 TUBG2Q9NRH3 451 aa17■□□□□ 0.31
LIME1-205ENST00000480139 BEX4Q9NWD9 120 aaPredicted RBP17■□□□□ 0.31
LIME1-205ENST00000480139 FBXO9Q9UK97 447 aaPredicted RBP17■□□□□ 0.31
LIME1-205ENST00000480139 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17■□□□□ 0.31
LIME1-205ENST00000480139 LAMP3Q9UQV4 416 aa17■□□□□ 0.31
LIME1-205ENST00000480139 CMAHPQ9Y471 501 aa17■□□□□ 0.31
LIME1-205ENST00000480139 RTTNQ86VV8 2226 aa17■□□□□ 0.31
LIME1-205ENST00000480139 B9A039 149 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 H3BSA7 217 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 OVOL3O00110 214 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 ATP6V1G2O95670 118 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 ABHD16AO95870 558 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 LYNP07948 512 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 PAX1P15863 534 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 NAA10P41227 235 aaPredicted RBP16.99■□□□□ 0.31
LIME1-205ENST00000480139 EVX1P49640 407 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 ADARB1P78563 741 aaKnown RBP16.99■□□□□ 0.31
LIME1-205ENST00000480139 SWI5Q1ZZU3 235 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 RGS7BPQ6MZT1 257 aaPredicted RBP16.99■□□□□ 0.31
LIME1-205ENST00000480139 VHLLQ6RSH7 139 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 DHRSXQ8N5I4 330 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 RHOXF1Q8NHV9 184 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 NRG4Q8WWG1 115 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 SLC7A6Q92536 515 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 SPTSSAQ969W0 71 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 MRPL24Q96A35 216 aaKnown RBP16.99■□□□□ 0.31
LIME1-205ENST00000480139 COG8Q96MW5 612 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 VCX3BQ9H321 246 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 CXorf56Q9H5V9 222 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 DNAJC27Q9NZQ0 273 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 RRP15Q9Y3B9 282 aaKnown RBP16.99■□□□□ 0.31
LIME1-205ENST00000480139 TMEM14AQ9Y6G1 99 aa16.99■□□□□ 0.31
LIME1-205ENST00000480139 SNTNA6NMZ2 147 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 H0YAE9 185 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 LCKP06239 509 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 DBHP09172 617 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 ZNF250P15622 560 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 ALOX5APP20292 161 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 SLC15A1P46059 708 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 GRB2P62993 217 aaKnown RBP16.98■□□□□ 0.31
LIME1-205ENST00000480139 IL18R1Q13478 541 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 MST1LQ2TV78 715 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 ZNF691Q5VV52 312 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 COLCA1Q6ZS62 124 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 RFPL4BQ6ZWI9 263 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 OR1J1Q8NGS3 322 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 ABHD4Q8TB40 342 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 Q96MT0 163 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 ADI1Q9BV57 179 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 PLK3Q9H4B4 646 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 ADGRL4Q9HBW9 690 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 GRIP1Q9Y3R0 1128 aa16.98■□□□□ 0.31
LIME1-205ENST00000480139 CSMD1Q96PZ7 3565 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 ENTPD6O75354 484 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 NGFP01138 241 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 MRPL3P09001 348 aaKnown RBP16.97■□□□□ 0.31
LIME1-205ENST00000480139 SBK2P0C263 348 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 ACSM4P0C7M7 580 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 BMP4P12644 408 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 OPRL1P41146 370 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 TPTEP56180 551 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 MSMPQ1L6U9 139 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 DEFB113Q30KQ7 82 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 CYGBQ8WWM9 190 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 APOBEC3DQ96AK3 386 aaPredicted RBP16.97■□□□□ 0.31
LIME1-205ENST00000480139 AMELYQ99218 206 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 KCNJ15Q99712 375 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 COPS4Q9BT78 406 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 C1QTNF5Q9BXJ0 243 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 ZNF701Q9NV72 531 aaPredicted RBP16.97■□□□□ 0.31
LIME1-205ENST00000480139 LAMP5Q9UJQ1 280 aa16.97■□□□□ 0.31
LIME1-205ENST00000480139 IGLV3-9A0A075B6K5 115 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 F5H5K5 113 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 M0R135 149 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 PHYHO14832 338 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 CAPGP40121 348 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms