RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ACKR4Q9NPB9 350 aa18.58■□□□□ 0.57
COL13A1-208ENST00000479733 NIT2Q9NQR4 276 aa18.58■□□□□ 0.57
COL13A1-208ENST00000479733 CHD9Q3L8U1 2897 aa18.58■□□□□ 0.57
COL13A1-208ENST00000479733 TEX13DA0A0J9YY54 714 aaPredicted RBP18.58■□□□□ 0.56
COL13A1-208ENST00000479733 PPT1P50897 306 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 HABP2Q14520 560 aaPredicted RBP18.58■□□□□ 0.56
COL13A1-208ENST00000479733 TGIF1Q15583 401 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 PRR22Q8IZ63 422 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 FAM160A2Q8N612 972 aaPredicted RBP18.58■□□□□ 0.56
COL13A1-208ENST00000479733 CYYR1Q96J86 154 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 DGAT2Q96PD7 388 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 TMEM100Q9NV29 134 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 MRPL22Q9NWU5 206 aaKnown RBP18.58■□□□□ 0.56
COL13A1-208ENST00000479733 LRP12Q9Y561 859 aa18.58■□□□□ 0.56
COL13A1-208ENST00000479733 EIF1AYO14602 144 aaKnown RBP18.57■□□□□ 0.56
COL13A1-208ENST00000479733 IFNA4P05014 189 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 SERPINA5P05154 406 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 HNRNPA1P09651 372 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL13A1-208ENST00000479733 SFTA3P0C7M3 94 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 EIF1AXP47813 144 aaKnown RBP18.57■□□□□ 0.56
COL13A1-208ENST00000479733 ID4P47928 161 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 RIDAP52758 137 aaKnown RBP18.57■□□□□ 0.56
COL13A1-208ENST00000479733 SGCAQ16586 387 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 PGAP1Q75T13 922 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 RCC2Q9P258 522 aaKnown RBP18.57■□□□□ 0.56
COL13A1-208ENST00000479733 GDF2Q9UK05 429 aaPredicted RBP18.57■□□□□ 0.56
COL13A1-208ENST00000479733 LOC101059948A0A1B0GTJ6 334 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 F8VVB4 439 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 F8VWA3 439 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 NUDT14O95848 222 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 TXNDC12O95881 172 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 IL2RAP01589 272 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 S100A6P06703 90 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 SMCO1Q147U7 214 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 ALG11Q2TAA5 492 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 TANGO2Q6ICL3 276 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 SPPL3Q8TCT6 385 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 ABHD6Q9BV23 337 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 OR5AC2Q9NZP5 309 aa18.57■□□□□ 0.56
COL13A1-208ENST00000479733 COLCA2A8K830 154 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 S100A9P06702 114 aaKnown RBP18.56■□□□□ 0.56
COL13A1-208ENST00000479733 NME2P22392 152 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 ARRB1P49407 418 aaPredicted RBP18.56■□□□□ 0.56
COL13A1-208ENST00000479733 TMEM31Q5JXX7 168 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 CLCC1Q96S66 551 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 NUP210LQ5VU65 1888 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 MUC22E2RYF6 1773 aaPredicted RBP18.56■□□□□ 0.56
COL13A1-208ENST00000479733 PHYHO14832 338 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 CTLA4P16410 223 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 HLA-GP17693 338 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 CD80P33681 288 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 RAB5BP61020 215 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 TOMM34Q15785 309 aaPredicted RBP18.56■□□□□ 0.56
COL13A1-208ENST00000479733 KDM8Q8N371 416 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 OR2I1PQ8NGU4 316 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 REV3LO60673 3130 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 METTL21EPA6NDL7 271 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 RAB27BO00194 218 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 TIMP1P01033 207 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 CFPP27918 469 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 GNALP38405 381 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 ACKR1Q16570 336 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 ZNF260Q3ZCT1 412 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 TEX30Q5JUR7 227 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 PARP12Q9H0J9 701 aaKnown RBP18.56■□□□□ 0.56
COL13A1-208ENST00000479733 CNTD2Q9H8S5 307 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 GSN-AS1Q9NRJ2 163 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 LPAR3Q9UBY5 353 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 PCDHGA1Q9Y5H4 931 aa18.56■□□□□ 0.56
COL13A1-208ENST00000479733 LOC107986453A0A1B0GWG9 222 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 C9JQL5 133 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 DUS4LO95620 317 aaKnown RBP18.55■□□□□ 0.56
COL13A1-208ENST00000479733 NPY4RP50391 375 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 F2RL1P55085 397 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 HTRA3P83110 453 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 ZP2Q05996 745 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 NAA40Q86UY6 237 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 LINC00346Q8IVM7 164 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 FRMD1Q8N878 549 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 LAT2Q9GZY6 243 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 GSKIPQ9P0R6 139 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 RNASEK-C17orf49H0YIS7 233 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 LRP3O75074 770 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 RUNX3Q13761 415 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 EMC4Q5J8M3 183 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 DMBX1Q8NFW5 382 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 OR51F2Q8NH61 342 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 AQP3Q92482 292 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 RTN4RQ9BZR6 473 aa18.55■□□□□ 0.56
COL13A1-208ENST00000479733 C2orf74A8MZ97 194 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 P2RY10O00398 339 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 SCDO00767 359 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 FBXO24O75426 580 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 MED6O75586 246 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 IGFBP3P17936 291 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-208ENST00000479733 CD1CP29017 333 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 GPR3P46089 330 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 INSM1Q01101 510 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-208ENST00000479733 SKP2Q13309 424 aa18.54■□□□□ 0.56
COL13A1-208ENST00000479733 TOMM20Q15388 145 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms