RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 AKIP1Q9NQ31 210 aa8.67□□□□□ -1.02
SCAMP3-206ENST00000478737 IGHV1-18A0A0C4DH31 117 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 A0A1W2PPL8 197 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 SLC22A23A1A5C7 686 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 ZNF503-AS2A6NEH8 195 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 RIIAD1A6NNX1 92 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 M0R1B8 84 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 IMPA2O14732 288 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 DHHO43323 396 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 IDH3BO43837 385 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 PRKYO43930 277 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 SMPD2O60906 423 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 IFNGP01579 166 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 HSMCR30P0CW71 290 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 HIST1H1CP16403 213 aaKnown RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 ZNF3P17036 446 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 NR4A1P22736 598 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 PSMA1P25786 263 aaKnown RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 S100A5P33763 92 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 OPRL1P41146 370 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 CAPZA2P47755 286 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 LSM3P62310 102 aaKnown RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 NKX6-1P78426 367 aaPredicted RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 TMED1Q13445 227 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 SPHARQ15513 63 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 RGS21Q2M5E4 152 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 ZNF404Q494X3 552 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 C10orf128Q5T292 105 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 LEG1Q6P5S2 330 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 DNM1P34Q6PK57 102 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 SLC22A25Q6T423 547 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 ZNF813Q6ZN06 617 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 LNX2Q8N448 690 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 NANOGP1Q8N7R0 232 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 IL17RDQ8NFM7 739 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 OR52E2Q8NGJ4 325 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 OR6Q1Q8NGQ2 317 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 RBP7Q96R05 134 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 DHRS9Q9BPW9 319 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 SLIRPQ9GZT3 109 aaKnown RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 RERGLQ9H628 205 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 FAIMQ9NVQ4 179 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 TMEM38BQ9NVV0 291 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 ZNF224Q9NZL3 707 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 VSX1Q9NZR4 365 aaPredicted RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 KLHL21Q9UJP4 597 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 LAMP3Q9UQV4 416 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 LSM2Q9Y333 95 aaKnown RBP8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 DSCAMO60469 2012 aa8.66□□□□□ -1.02
SCAMP3-206ENST00000478737 RTTNQ86VV8 2226 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 IGKV1D-43A0A0B4J1Z2 117 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 LOC100506127A0A0U1RQW1 187 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 PNMA8CA0A1B0GUJ8 204 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 SURF4O15260 269 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 CECR9P0C854 216 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 OR8G3PP0DMU2 310 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 CTLA4P16410 223 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 CD40LGP29965 261 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 CDKN2AP42771 156 aaKnown RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 MTNR1AP48039 350 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 CDH11P55287 796 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 EFNB1P98172 346 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 NAAAQ02083 359 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 SPOCK1Q08629 439 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 TSTQ16762 297 aaKnown RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 THEM4Q5T1C6 240 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 ACSM5Q6NUN0 579 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 SLC25A47Q6Q0C1 308 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 B3GLCTQ6Y288 498 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 DPPA2Q7Z7J5 298 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 SKA3Q8IX90 412 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 SLC22A24Q8N4F4 322 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 CYB561A3Q8NBI2 242 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 OR52I1Q8NGK6 324 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 TMEM171Q8WVE6 324 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 NANOS1Q8WY41 292 aaKnown RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 HTRA1Q92743 480 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 RNFT2Q96EX2 444 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 OPALINQ96PE5 141 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 NMNAT3Q96T66 252 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 TRAF4Q9BUZ4 470 aaPredicted RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 JAM3Q9BX67 310 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 NXF2Q9GZY0 626 aaKnown RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 RPRD1BQ9NQG5 326 aaKnown RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 DLL4Q9NR61 685 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 NDUFB11Q9NX14 153 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 H2AFY2Q9P0M6 372 aaPredicted RBP8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 STUB1Q9UNE7 303 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 PEX16Q9Y5Y5 336 aa8.65□□□□□ -1.02
SCAMP3-206ENST00000478737 METTL15A6NJ78 407 aa8.64□□□□□ -1.03
SCAMP3-206ENST00000478737 ATP6V1G2-DDX39BF2Z307 99 aa8.64□□□□□ -1.03
SCAMP3-206ENST00000478737 SLC16A7O60669 478 aa8.64□□□□□ -1.03
SCAMP3-206ENST00000478737 PFDN1O60925 122 aa8.64□□□□□ -1.03
SCAMP3-206ENST00000478737 KHDRBS3O75525 346 aaKnown RBP8.64□□□□□ -1.03
SCAMP3-206ENST00000478737 FARS2O95363 451 aaKnown RBP8.64□□□□□ -1.03
SCAMP3-206ENST00000478737 HLA-HP01893 362 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms