RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ZMAT1Q5H9K5 638 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 FAM120AOSQ5T036 256 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 USP51Q70EK9 711 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 LNX2Q8N448 690 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 AQP11Q8NBQ7 271 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 OR8D4Q8NGM9 314 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 HAVCR1Q96D42 359 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 ELMOD3Q96FG2 381 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 THTPAQ9BU02 230 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 REEP1Q9H902 201 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 CYB5R1Q9UHQ9 305 aa18.48■□□□□ 0.55
COL9A3-211ENST00000477612 PURGQ9UJV8 347 aaKnown RBP18.48■□□□□ 0.55
COL9A3-211ENST00000477612 AQP12BA6NM10 295 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 WNT9BO14905 357 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 SPRY3O43610 288 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 DBHP09172 617 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 CENPAP49450 140 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 DVL1P1P54792 670 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-211ENST00000477612 LMO4P61968 165 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 CLEC12AQ5QGZ9 265 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 SLC35F1Q5T1Q4 408 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 SLC18B1Q6NT16 456 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 CD300LDQ6UXZ3 194 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 AQP12AQ8IXF9 295 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 LRGUKQ96M69 825 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 MDFIQ99750 246 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 MRPL22Q9NWU5 206 aaKnown RBP18.47■□□□□ 0.55
COL9A3-211ENST00000477612 KCNG2Q9UJ96 466 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 POLR1DQ9Y2S0 133 aa18.47■□□□□ 0.55
COL9A3-211ENST00000477612 SAMHD1Q9Y3Z3 626 aaKnown RBP18.47■□□□□ 0.55
COL9A3-211ENST00000477612 B4DSR2 109 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 UBOX5O94941 541 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 RAC2P15153 192 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 HOXB6P17509 224 aaKnown RBP18.46■□□□□ 0.55
COL9A3-211ENST00000477612 GGT2P36268 569 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 HFEQ30201 348 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 FBXW12Q6X9E4 464 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 COLCA1Q6ZS62 124 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 ADGRG5Q8IZF4 528 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 OR5L1Q8NGL2 311 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 CCDC124Q96CT7 223 aaKnown RBP18.46■□□□□ 0.55
COL9A3-211ENST00000477612 CMBLQ96DG6 245 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 EGLN1Q9GZT9 426 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 FN3KQ9H479 309 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 MSL2Q9HCI7 577 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 BAIAP2Q9UQB8 552 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 U3KQV3 271 aa18.46■□□□□ 0.55
COL9A3-211ENST00000477612 TPD52L2O43399 206 aaKnown RBP18.45■□□□□ 0.54
COL9A3-211ENST00000477612 TIMM8AO60220 97 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-211ENST00000477612 DBPQ10586 325 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-211ENST00000477612 CCNIQ14094 377 aa18.45■□□□□ 0.54
COL9A3-211ENST00000477612 CORO6Q6QEF8 472 aa18.45■□□□□ 0.54
COL9A3-211ENST00000477612 APOBEC3DQ96AK3 386 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-211ENST00000477612 SLC7A6OSQ96CW6 309 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-211ENST00000477612 CHID1Q9BWS9 393 aa18.45■□□□□ 0.54
COL9A3-211ENST00000477612 TSSK6Q9BXA6 273 aa18.45■□□□□ 0.54
COL9A3-211ENST00000477612 PNRC2Q9NPJ4 139 aaKnown RBP18.45■□□□□ 0.54
COL9A3-211ENST00000477612 CACNG2Q9Y698 323 aa18.45■□□□□ 0.54
COL9A3-211ENST00000477612 COL6A5A8TX70 2615 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 ARRDC5A6NEK1 342 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 FAM157AC9JC47 383 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 CLDN25C9JDP6 229 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 ECH1Q13011 328 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 CR1LQ2VPA4 569 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 DNAL1Q4LDG9 190 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 CFAP77Q6ZQR2 320 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 Q6ZR03 302 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 SLC37A3Q8NCC5 494 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 OR2T4Q8NH00 348 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 CANT1Q8WVQ1 401 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 RBM4Q9BWF3 364 aaKnown RBP18.44■□□□□ 0.54
COL9A3-211ENST00000477612 CDADC1Q9BWV3 514 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 C1QTNF5Q9BXJ0 243 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 WIPI2Q9Y4P8 454 aa18.44■□□□□ 0.54
COL9A3-211ENST00000477612 GYG2O15488 501 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 CST1P01037 141 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 HNF1AP20823 631 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 SLC3A1Q07837 685 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 SPRNQ5BIV9 151 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-211ENST00000477612 LINC00346Q8IVM7 164 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 CYB561A3Q8NBI2 242 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 OR2T33Q8NG76 320 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 OR10G2Q8NGC3 310 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 OR2AJ1Q8NGZ0 328 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 OR4Q3Q8NH05 313 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 ZNRF4Q8WWF5 429 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 NMNAT2Q9BZQ4 307 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 NARFLQ9H6Q4 476 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 TBC1D23Q9NUY8 699 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 TREM2Q9NZC2 230 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 IL19Q9UHD0 177 aa18.43■□□□□ 0.54
COL9A3-211ENST00000477612 TMEFF2Q9UIK5 374 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-211ENST00000477612 DHRS12A0PJE2 317 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 ACSM4P0C7M7 580 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 SRD5A1P18405 259 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 PCMT1P22061 227 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 SLC25A1P53007 311 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 TNFAIP6P98066 277 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-211ENST00000477612 PCK2Q16822 640 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms