RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ZYG11AQ6WRX3 759 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 MRPL55Q7Z7F7 128 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CDKL3Q8IVW4 592 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 OSR2Q8N2R0 312 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 GTPBP8Q8N3Z3 284 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 COX18Q8N8Q8 333 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 NECAP1Q8NC96 275 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CHST4Q8NCG5 386 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 LILRB4Q8NHJ6 448 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 LINC01560Q8TB33 94 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 OR51E1Q8TCB6 317 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 APH1BQ8WW43 257 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 SLC38A4Q969I6 547 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DCPSQ96C86 337 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 HSD17B10Q99714 261 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 SULT4A1Q9BR01 284 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CCDC77Q9BR77 488 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 CCDC59Q9P031 241 aaKnown RBP1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DUX4Q9UBX2 424 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 VANGL2Q9ULK5 521 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 WIF1Q9Y5W5 379 aa1.78□□□□□ -2.12
TARDBP-208ENST00000477447 DOCK8Q8NF50 2099 aa1.78□□□□□ -2.13
TARDBP-208ENST00000477447 PTPRTO14522 1441 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 TRAV19A0A0A6YYK7 116 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 C5orf63A6NC05 138 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 H0YJW9 148 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 SMKR1H3BMG3 65 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 H7C417 338 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 SCAMP2O15127 329 aaKnown RBP1.77□□□□□ -2.13
TARDBP-208ENST00000477447 SOCS1O15524 211 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 RAD51CO43502 376 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CHST1O43916 411 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CDC40O60508 579 aaKnown RBP eCLIP1.77□□□□□ -2.135e-6■■□□□ 12.3
TARDBP-208ENST00000477447 REM1O75628 298 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 H6PDO95479 791 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 SERPINE2P07093 398 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 OR8U9P0C7N5 309 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CT45A6P0DMU7 189 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CT45A5P0DMU8 189 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CT45A7P0DMV0 189 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 PRR3P79522 188 aaKnown RBP1.77□□□□□ -2.13
TARDBP-208ENST00000477447 SRSF5Q13243 272 aaKnown RBP1.77□□□□□ -2.13
TARDBP-208ENST00000477447 MPV17L2Q567V2 206 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 HSP90AB3PQ58FF7 597 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 TCEAL5Q5H9L2 206 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CT45A1Q5HYN5 189 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CCDC183Q5T5S1 534 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 SLC16A13Q7RTY0 426 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CMC1Q7Z7K0 106 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 NKAIN4Q8IVV8 208 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 OR52E2Q8NGJ4 325 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 OR6N1Q8NGY5 312 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CT45A3Q8NHU0 189 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 CIRBP-AS1Q8TBR5 109 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 TCEAL3Q969E4 200 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 TBL1YQ9BQ87 522 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 TIMM29Q9BSF4 260 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 OSBPL11Q9BXB4 747 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 C1orf198Q9H425 327 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 ZNF160Q9HCG1 818 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 RETNQ9HD89 108 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 NMRK1Q9NWW6 199 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 MTFP1Q9UDX5 166 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 S4R3C0 116 aa1.77□□□□□ -2.13
TARDBP-208ENST00000477447 AKNAQ7Z591 1439 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 TRBV9A0A0B4J1U6 114 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 TRBV11-1A0A0K0K1C0 115 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 NCBP2LA6PVI3 153 aaKnown RBP1.76□□□□□ -2.13
TARDBP-208ENST00000477447 K7EM74 188 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 DNASE2O00115 360 aaPredicted RBP1.76□□□□□ -2.13
TARDBP-208ENST00000477447 NDUFAB1O14561 156 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CHST10O43529 356 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 EIF4E2O60573 245 aaKnown RBP1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CLDN11O75508 207 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 SLC22A5O76082 557 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CDRT1O95170 752 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 ZNF688P0C7X2 276 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CD37P11049 281 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CCNG1P51959 295 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 SYNJ2BPP57105 145 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 TAS2R31P59538 309 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CCNA1P78396 465 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CRADDP78560 199 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 ZNF266Q14584 549 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 TRAM2Q15035 370 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 ALKBH6Q3KRA9 238 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 KPRPQ5T749 579 aaPredicted RBP1.76□□□□□ -2.13
TARDBP-208ENST00000477447 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 CARD17Q5XLA6 110 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 LRRC66Q68CR7 880 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 C12orf54Q6X4T0 127 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 NPWQ8N729 165 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 LRRC52Q8N7C0 313 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 OR11H7Q8NGC8 314 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 OR9A2Q8NGT5 310 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 LYPD6BQ8NI32 183 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 COL21A1Q96P44 957 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 C20orf24Q9BUV8 137 aa1.76□□□□□ -2.13
TARDBP-208ENST00000477447 ANKRD60Q9BZ19 345 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms