RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 RPS4XP62701 263 aaKnown RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 GALK2Q01415 458 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 HSF2Q03933 536 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 FAM27E3Q08E93 113 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 MED21Q13503 144 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 FHL1Q13642 323 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 DAG1Q14118 895 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 GINS1Q14691 196 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SEC23BQ15437 767 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 GUSBP1Q15486 140 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SNAPC1Q16533 368 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SGCAQ16586 387 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 BEX5Q5H9J7 111 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 LCN1P1Q5VSP4 162 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 C9orf135Q5VTT2 229 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 TTC23Q5W5X9 447 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 LEG1Q6P5S2 330 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 MYO7BQ6PIF6 2116 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF474Q6S9Z5 364 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF813Q6ZN06 617 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF620Q6ZNG0 422 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC16A14Q7RTX9 510 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 TMEM200AQ86VY9 491 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 LIX1LQ8IVB5 337 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 C20orf196Q8IYI0 205 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 PARP8Q8N3A8 854 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF433Q8N7K0 673 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SYT14Q8NB59 555 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 RELL2Q8NC24 303 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 PROKR2Q8NFJ6 384 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 OR52E2Q8NGJ4 325 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 OR4C15Q8NGM1 316 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 OR1J2Q8NGS2 313 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 NSMAFQ92636 917 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 MCHR2Q969V1 340 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLCO4A1Q96BD0 722 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 MRPL48Q96GC5 212 aaKnown RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZC3HAV1LQ96H79 300 aaKnown RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 TXNDC15Q96J42 360 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 Q96M85 177 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 RDH12Q96NR8 316 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 DACH2Q96NX9 599 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ALKBH3Q96Q83 286 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SNX18Q96RF0 628 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 GPX7Q96SL4 187 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 CIB1Q99828 191 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 PKP2Q99959 881 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 APOL4Q9BPW4 351 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 RSPO3Q9BXY4 272 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 C1orf198Q9H425 327 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 RIBC2Q9H4K1 309 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 EGLN3Q9H6Z9 239 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC7A10Q9NS82 523 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 IL20Q9NYY1 176 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 EIF3KQ9UBQ5 218 aaKnown RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 SEC14L4Q9UDX3 406 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 PLEKHB1Q9UF11 243 aaPredicted RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 KCNN3Q9UGI6 736 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 IL20RAQ9UHF4 553 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 MOKQ9UQ07 419 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 PHF3Q92576 2039 aaKnown RBP3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZFYVE26Q68DK2 2539 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 ATMQ13315 3056 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 LOC400499M0QZD8 3231 aa3.93□□□□□ -1.78
NSMCE4A-208ENST00000477289 NBEAQ8NFP9 2946 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 PCNX3Q9H6A9 2034 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC22A23A1A5C7 686 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 PRSS37A4D1T9 235 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 OR5H1A6NKK0 313 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 KDM4EB2RXH2 506 aaPredicted RBP3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 M0R1B8 84 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 RAMP1O60894 148 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 UPK3AO75631 287 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 TXNDC12O95881 172 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 APOC1P02654 83 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 TSPAN19P0C672 248 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 PGA4P0DJD7 388 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 PGA3P0DJD8 388 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 PF4V1P10720 104 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 ANPEPP15144 967 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 HIST1H1CP16403 213 aaKnown RBP3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 MSR1P21757 451 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 IGHV1-2P23083 117 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 PTAFRP25105 342 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 LAP3P28838 519 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 SSTR2P30874 369 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 APLNRP35414 380 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 HSPA13P48723 471 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 P2RY4P51582 365 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 IST1P53990 364 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 RPS23P62266 143 aaKnown RBP3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 ELF3P78545 371 aaPredicted RBP3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 MRPS34P82930 218 aaKnown RBP3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 ARF1P84077 181 aaKnown RBP3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC34A1Q06495 639 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 SCRN3Q0VDG4 424 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 NPRL3Q12980 569 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 TAF13Q15543 124 aa3.92□□□□□ -1.78
NSMCE4A-208ENST00000477289 GABRA6Q16445 453 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms