RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 P4HA3Q7Z4N8 544 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF100Q8IYN0 542 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 CISD2Q8N5K1 135 aaKnown RBP12.66□□□□□ -0.38
COL4A6-206ENST00000477085 GFI1Q99684 422 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 SLC30A2Q9BRI3 323 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 AKIP1Q9NQ31 210 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 CACNA1AO00555 2505 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 NCOA6Q14686 2063 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-206ENST00000477085 A0A075B6Q4 140 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 TRBV5-7A0A0A0MS05 114 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 TRAV1-2A0A0B4J238 106 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF503-AS2A6NEH8 195 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 TTRP02766 147 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 DBHP09172 617 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 MMP7P09237 267 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-206ENST00000477085 OCM2P0CE71 109 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 SLC2A1P11166 492 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 BMP4P12644 408 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF32P17041 273 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 KIR2DL2P43627 348 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF121P58317 390 aaPredicted RBP12.66□□□□□ -0.38
COL4A6-206ENST00000477085 FOXF2Q12947 444 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ELFN2Q5R3F8 820 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 UNQ6494/PRO21346Q6UXR6 183 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF813Q6ZN06 617 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF627Q7L945 461 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 BTLAQ7Z6A9 289 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 MFSD4AQ8N468 514 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 GPR148Q8TDV2 347 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 WNT2BQ93097 391 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 PBOV1Q9GZY1 135 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 COMMD4Q9H0A8 199 aa12.66□□□□□ -0.38
COL4A6-206ENST00000477085 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 A0A096LPE4 126 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 A0A1W2PPZ6 126 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 OR6C65A6NJZ3 312 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 SYNGR3O43761 229 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 LMX1BO60663 402 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 IL18BPO95998 194 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 ISG15P05161 165 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 SRMP19623 302 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 PLA2G5P39877 138 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 OR3A2P47893 321 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 TDGF1P3P51864 188 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 PSMA6P60900 246 aaKnown RBP12.65□□□□□ -0.38
COL4A6-206ENST00000477085 PSG4Q00888 419 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 GALK2Q01415 458 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 PRR30Q53SZ7 412 aaPredicted RBP12.65□□□□□ -0.38
COL4A6-206ENST00000477085 NSUN5P2Q63ZY6 315 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF774Q6NX45 483 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 ELMOD2Q8IZ81 293 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 UBE2J2Q8N2K1 259 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 ASB5Q8WWX0 329 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 ATF6BQ99941 703 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 SOX7Q9BT81 388 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 WNT5BQ9H1J7 359 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 GLRX2Q9NS18 164 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 UPB1Q9UBR1 384 aa12.65□□□□□ -0.38
COL4A6-206ENST00000477085 CHD8Q9HCK8 2581 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TRAV8-7A0A075B6U6 113 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 IQCMA0A1B0GVH7 501 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 MED19A0JLT2 244 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-206ENST00000477085 P2RY10O00398 339 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TOXO94900 526 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 ITGA5P08648 1049 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 ACSM4P0C7M7 580 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 HSD11B1P28845 292 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 OTX1P32242 354 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-206ENST00000477085 CX3CR1P49238 355 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 HGFACQ04756 655 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TAF13Q15543 124 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 STK11Q15831 433 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF829Q3KNS6 432 aaPredicted RBP12.64□□□□□ -0.39
COL4A6-206ENST00000477085 SLC25A35Q3KQZ1 300 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 NRN1LQ496H8 165 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 HSD17B12Q53GQ0 312 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 KRTCAP3Q53RY4 240 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 BCL2L15Q5TBC7 163 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 FAM180AQ6UWF9 173 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 AKR7LQ8NHP1 331 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 PHYHIPQ92561 330 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 KCNJ15Q99712 375 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 SLC25A18Q9H1K4 315 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 MIXL1Q9H2W2 232 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 SMURF1Q9HCE7 757 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 PLEK2Q9NYT0 353 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 MALT1Q9UDY8 824 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 FAM215AQ9Y5M1 114 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 A0A1B0GTI1 187 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 J3QRK9 145 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 ARL6IP5O75915 188 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms