RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 TMEM165Q9HC07 324 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 FGFR1OP2Q9NVK5 253 aa10.98□□□□□ -0.65
MRPL55-228ENST00000476267 COA3Q9Y2R0 106 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 SOX21Q9Y651 276 aaPredicted RBP10.98□□□□□ -0.65
MRPL55-228ENST00000476267 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 H0YL77 283 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 CXCR6O00574 342 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 XKRYO14609 159 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SLC22A2O15244 555 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 RER1O15258 196 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SURF4O15260 269 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SLC16A7O60669 478 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SASH3O75995 380 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 H2AFXP16104 143 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-228ENST00000476267 RPL4P36578 427 aaKnown RBP10.97□□□□□ -0.65
MRPL55-228ENST00000476267 OMPP47874 163 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 LIPEQ05469 1076 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 BAMBIQ13145 260 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SLC9A3R2Q15599 337 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 RSPO1Q2MKA7 263 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-228ENST00000476267 KRTAP27-1Q3LI81 207 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 ESCO2Q56NI9 601 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 LEG1Q6P5S2 330 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 PTCHD4Q6ZW05 846 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 GLB1L2Q8IW92 636 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 OR5AS1Q8N127 324 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 PARP8Q8N3A8 854 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 POU5F2Q8N7G0 328 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 OR8G5Q8NG78 346 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 OR10AD1Q8NGE0 317 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 FAM46AQ96IP4 442 aaKnown RBP10.97□□□□□ -0.65
MRPL55-228ENST00000476267 HSH2DQ96JZ2 352 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SLC30A2Q9BRI3 323 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 SSBP3Q9BWW4 388 aaPredicted RBP10.97□□□□□ -0.65
MRPL55-228ENST00000476267 PRDM13Q9H4Q3 707 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 UNKLQ9H9P5 680 aaKnown RBP10.97□□□□□ -0.65
MRPL55-228ENST00000476267 OR5V1Q9UGF6 321 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 IL20RAQ9UHF4 553 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 LHFPL6Q9Y693 200 aa10.97□□□□□ -0.65
MRPL55-228ENST00000476267 IGHV2-70DA0A0C4DH43 119 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 IQCF6A8MYZ5 107 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 IFNL4K9M1U5 179 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 DCTN6O00399 190 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 KHDRBS3O75525 346 aaKnown RBP10.96□□□□□ -0.65
MRPL55-228ENST00000476267 NDUFB2O95178 105 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 ZNF682O95780 498 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 GPANK1O95872 356 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 TXNDC12O95881 172 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 CYB5R3P00387 301 aaPredicted RBP10.96□□□□□ -0.65
MRPL55-228ENST00000476267 TROVE2P10155 538 aaKnown RBP eCLIP10.96□□□□□ -0.65
MRPL55-228ENST00000476267 PMELP40967 661 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 RGS6P49758 472 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 ZNF404Q494X3 552 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 GPR139Q6DWJ6 353 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 OR2T2Q6IF00 324 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 COLCA1Q6ZS62 124 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 ARPINQ7Z6K5 226 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 ADCK1Q86TW2 530 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 KLBQ86Z14 1044 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 OR52E2Q8NGJ4 325 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.65
MRPL55-228ENST00000476267 COQ7Q99807 217 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 TMEM246Q9BRR3 403 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 FUZQ9BT04 418 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 NUAK2Q9H093 628 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 PTTG3PQ9NZH4 202 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 ARMCX1Q9P291 453 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 TMEM5Q9Y2B1 443 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 AP3M1Q9Y2T2 418 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 CAPN7Q9Y6W3 813 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 ENPP4Q9Y6X5 453 aa10.96□□□□□ -0.65
MRPL55-228ENST00000476267 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.66
MRPL55-228ENST00000476267 IGLV1-36A0A0B4J1U3 117 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 A0A1W2PRQ8 180 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 ZNF205O95201 554 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 SERPINA1P01009 418 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 RPS2P15880 293 aaKnown RBP10.95□□□□□ -0.66
MRPL55-228ENST00000476267 CDKN2AP42771 156 aaKnown RBP10.95□□□□□ -0.66
MRPL55-228ENST00000476267 GATA4P43694 442 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 GSK3BP49841 420 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 IL13RA1P78552 427 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 SF3A3Q12874 501 aaKnown RBP eCLIP10.95□□□□□ -0.66
MRPL55-228ENST00000476267 COX10Q12887 443 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 DGCR6Q14129 220 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 SEC23BQ15437 767 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 SLC27A4Q6P1M0 643 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 ZNF841Q6ZN19 808 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 JAZF1Q86VZ6 243 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 OR13G1Q8NGZ3 307 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 RP9Q8TA86 221 aaKnown RBP10.95□□□□□ -0.66
MRPL55-228ENST00000476267 RAB40AQ8WXH6 277 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 SLC25A28Q96A46 364 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 APOBEC3DQ96AK3 386 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-228ENST00000476267 MS4A7Q9GZW8 240 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-228ENST00000476267 HDHD2Q9H0R4 259 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 MIOXQ9UGB7 285 aa10.95□□□□□ -0.66
MRPL55-228ENST00000476267 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 TRAV40A0A0B4J280 105 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms