RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CENPOQ9BU64 300 aa10.76□□□□□ -0.69
MRPL55-227ENST00000475832 HDHD5Q9BXW7 423 aa10.76□□□□□ -0.69
MRPL55-227ENST00000475832 HDHD2Q9H0R4 259 aa10.76□□□□□ -0.69
MRPL55-227ENST00000475832 SLITRK2Q9H156 845 aa10.76□□□□□ -0.69
MRPL55-227ENST00000475832 TP63Q9H3D4 680 aaPredicted RBP10.76□□□□□ -0.69
MRPL55-227ENST00000475832 RNF121Q9H920 327 aa10.76□□□□□ -0.69
MRPL55-227ENST00000475832 TMEM269A0A1B0GVZ9 245 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MBD3L4A6NDZ8 208 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MBD3L3A6NE82 208 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 TRIM64BA6NI03 449 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MBD3L5A6NJ08 208 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 GABRPO00591 440 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 SGCEO43556 437 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 B4GALT1P15291 398 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MPGP29372 298 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 CASP6P55212 293 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 FABP5Q01469 135 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 ENDOGQ14249 297 aaKnown RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 RAB35Q15286 201 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 ELFN2Q5R3F8 820 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 TMEM53Q6P2H8 277 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 CEACAM19Q7Z692 300 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 C9orf106Q8NAJ2 232 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MBD3L2Q8NHZ7 208 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 NDNFQ8TB73 568 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 GPR148Q8TDV2 347 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 SNRNP40Q96DI7 357 aaKnown RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MAP6Q96JE9 813 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 C4orf45Q96LM5 186 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 ATF6BQ99941 703 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 PLEK2Q9NYT0 353 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 MALT1Q9UDY8 824 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 PROCRQ9UNN8 238 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 SIRT4Q9Y6E7 314 aaPredicted RBP10.75□□□□□ -0.69
MRPL55-227ENST00000475832 ITPR2Q14571 2701 aa10.75□□□□□ -0.69
MRPL55-227ENST00000475832 ACOD1A6NK06 481 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 TTLL8A6PVC2 850 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 PRR32B1ATL7 298 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 CASKO14936 926 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 RER1O15258 196 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 IL1AP01583 271 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 UBCP0CG48 685 aaKnown RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 TMIGD3P0DMS9 266 aaPredicted RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 CD8BP10966 210 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 PSKH1P11801 424 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 EDN3P14138 238 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 ARR3P36575 388 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 MMP16P51512 607 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 PSMA6P60900 246 aaKnown RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 HIST1H3AP68431 136 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 DOC2BQ14184 412 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 HIST2H3PS2Q5TEC6 136 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 ANKRD16Q6P6B7 361 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 CFAP77Q6ZQR2 320 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 HIST2H3AQ71DI3 136 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 ZNF627Q7L945 461 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 LUZP2Q86TE4 346 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 CCDC36Q8IYA8 594 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 GCNT2Q8N0V5 402 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 ZNF283Q8N7M2 679 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 ZNF837Q96EG3 531 aaPredicted RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 PGLYRP3Q96LB9 341 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 KCNJ15Q99712 375 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 SH3GL3Q99963 347 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 SLX1AQ9BQ83 275 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 MED18Q9BUE0 208 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 DDX28Q9NUL7 540 aaKnown RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 CCDC59Q9P031 241 aaKnown RBP10.74□□□□□ -0.69
MRPL55-227ENST00000475832 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 OR52A1Q9UKL2 312 aa10.74□□□□□ -0.69
MRPL55-227ENST00000475832 POLQO75417 2590 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 OR4C45A6NMZ5 311 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 ZFPL1O95159 310 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 UBL3O95164 117 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 CDRT1O95170 752 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 CD2P06729 351 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 OCM2P0CE71 109 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 HOXC12P31275 282 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 TIMP3P35625 211 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 CX3CR1P49238 355 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 MTNR1BP49286 362 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 RORCP51449 518 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 TDGF1P3P51864 188 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 TPTEP56180 551 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
MRPL55-227ENST00000475832 PLP2Q04941 152 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 Q499Y3 187 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 HSD17B12Q53GQ0 312 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 Q6ZT83 130 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 LINGO2Q7L985 606 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 TPRA1Q86W33 373 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 CATSPERDQ86XM0 798 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 CROCCP3Q8IVE0 287 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 DYNC2LI1Q8TCX1 351 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
MRPL55-227ENST00000475832 TSEN15Q8WW01 171 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms