RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 TMEM158Q8WZ71 300 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 YIPF5Q969M3 257 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 HCAR1Q9BXC0 346 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 DGCR6LQ9BY27 220 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 TAS2R1Q9NYW7 299 aa17.44■□□□□ 0.38
SNX13-206ENST00000474067 PURGQ9UJV8 347 aaKnown RBP17.44■□□□□ 0.38
SNX13-206ENST00000474067 ZANQ9Y493 2812 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 RER1O15258 196 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 GYG2O15488 501 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 MSMBP08118 114 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 HIST1H3AP68431 136 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 MALLQ13021 153 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 PSG7Q13046 419 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 CCNIQ14094 377 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 CR1LQ2VPA4 569 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 CCDC92Q53HC0 331 aaPredicted RBP17.43■□□□□ 0.38
SNX13-206ENST00000474067 CLEC12AQ5QGZ9 265 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 HIST2H3PS2Q5TEC6 136 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 HIST2H3AQ71DI3 136 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 PROKR2Q8NFJ6 384 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 OR9Q2Q8NGE9 314 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 CCL17Q92583 94 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 SPTSSAQ969W0 71 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 CCDC124Q96CT7 223 aaKnown RBP17.43■□□□□ 0.38
SNX13-206ENST00000474067 HAVCR1Q96D42 359 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 TSSK2Q96PF2 358 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 PITX2Q99697 317 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 ATF6BQ99941 703 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 THTPAQ9BU02 230 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 IL19Q9UHD0 177 aa17.43■□□□□ 0.38
SNX13-206ENST00000474067 NOP16Q9Y3C1 178 aaKnown RBP17.43■□□□□ 0.38
SNX13-206ENST00000474067 RTTNQ86VV8 2226 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 TRAV20A0A0B4J274 112 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 ARRDC5A6NEK1 342 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 KIAA1324LA8MWY0 1029 aaPredicted RBP17.42■□□□□ 0.38
SNX13-206ENST00000474067 MPZL1O95297 269 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 CST1P01037 141 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 SRP14P37108 136 aaKnown RBP17.42■□□□□ 0.38
SNX13-206ENST00000474067 ACSM5Q6NUN0 579 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 FBXW12Q6X9E4 464 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.42■□□□□ 0.38
SNX13-206ENST00000474067 TEX47Q8TBZ9 253 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 ZNF582Q96NG8 517 aaPredicted RBP17.42■□□□□ 0.38
SNX13-206ENST00000474067 BTBD10Q9BSF8 475 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 TEX12Q9BXU0 123 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 EGLN3Q9H6Z9 239 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 ZNF556Q9HAH1 456 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 LHFPL6Q9Y693 200 aa17.42■□□□□ 0.38
SNX13-206ENST00000474067 ZSCAN5BA6NJL1 495 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 RIIAD1A6NNX1 92 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 BHLHE40O14503 412 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 GASTP01350 101 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 ZNF3P17036 446 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 RASSF2P50749 326 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 TPTEP56180 551 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 CDK5R2Q13319 367 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 SLC35F1Q5T1Q4 408 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 ZNF770Q6IQ21 691 aaPredicted RBP17.41■□□□□ 0.38
SNX13-206ENST00000474067 LNX2Q8N448 690 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 TMEM186Q96B77 213 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 CMBLQ96DG6 245 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 TSSK6Q9BXA6 273 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 STARD10Q9Y365 291 aa17.41■□□□□ 0.38
SNX13-206ENST00000474067 DHRS12A0PJE2 317 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 OR6C68A6NDL8 312 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 DCTN6O00399 190 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 T-ENOLP0DO92 83 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 PAICSP22234 425 aaKnown RBP17.4■□□□□ 0.38
SNX13-206ENST00000474067 FMO3P31513 532 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 MVKQ03426 396 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 SLC18B1Q6NT16 456 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 SHQ1Q6PI26 577 aaKnown RBP17.4■□□□□ 0.38
SNX13-206ENST00000474067 CD300LDQ6UXZ3 194 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 OR2Z1Q8NG97 314 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 OR10G2Q8NGC3 310 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 OR13G1Q8NGZ3 307 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 SPATA3Q8NHX4 192 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 GIPC3Q8TF64 312 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 GAL3ST1Q99999 423 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 CHID1Q9BWS9 393 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 NARFLQ9H6Q4 476 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 ZNF665Q9H7R5 613 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 MSL2Q9HCI7 577 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 CYB5R1Q9UHQ9 305 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 WIPI2Q9Y4P8 454 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 U3KQV3 271 aa17.4■□□□□ 0.38
SNX13-206ENST00000474067 GATA3P23771 443 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 CPT2P23786 658 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 IL2RGP31785 369 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 SRP9P49458 86 aaKnown RBP17.39■□□□□ 0.37
SNX13-206ENST00000474067 MS4A2Q01362 244 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 FLOT2Q14254 428 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 LIPNQ5VXI9 398 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 CXXC5Q7LFL8 322 aaKnown RBP17.39■□□□□ 0.37
SNX13-206ENST00000474067 SPICQ8N5J4 248 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 OR8G5Q8NG78 346 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 ST7LQ8TDW4 575 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 SP140LQ9H930 580 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 TREM2Q9NZC2 230 aa17.39■□□□□ 0.37
SNX13-206ENST00000474067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms