RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ANKRA2Q9H9E1 313 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 C12orf4Q9NQ89 552 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 RPRD1BQ9NQG5 326 aaKnown RBP3.12□□□□□ -1.91
BRCA1-212ENST00000473961 DIABLOQ9NR28 239 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 TNFRSF19Q9NS68 423 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 TAS2R1Q9NYW7 299 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 CALYQ9NYX4 217 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 STMN3Q9NZ72 180 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 Q9UF83 564 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 LGALS13Q9UHV8 139 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ERGIC3Q9Y282 383 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ADGRA3Q8IWK6 1321 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 ADAMTS12P58397 1594 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 CPDO75976 1380 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 PALLDQ8WX93 1383 aa3.12□□□□□ -1.91
BRCA1-212ENST00000473961 MROH1Q8NDA8 1641 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 DISP2A7MBM2 1401 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF609O15014 1411 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PIK3C2AO00443 1686 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CLTCQ00610 1675 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 FAM208AQ9UK61 1670 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 C4AP0C0L4 1744 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 C4BP0C0L5 1744 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ARPC4-TTLL3A0A0A6YYG9 625 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 A0A0J9YXY3 114 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 LINC00854A0A1B0GVQ3 168 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 A0A1W2PQ72 361 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ZFP92A6NM28 416 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 SUPT3HB4E1H0 165 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 H0YJX3 145 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 TXNDC9O14530 226 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ACOX3O15254 700 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 FGGP02679 453 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PLEKP08567 350 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CT62P0C5K7 136 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 RBMY1A1P0DJD3 496 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CALM1P0DP23 149 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CALM2P0DP24 149 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CALM3P0DP25 149 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 HSPD1P10809 573 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 THRAP10827 490 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CD9P21926 228 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 STOMP27105 288 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 SLC26A3P40879 764 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 SLCO1A2P46721 670 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 BLVRAP53004 296 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 APOC4P55056 127 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PLTPP55058 493 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CAV1Q03135 178 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 LIPEQ05469 1076 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 MAB21L1Q13394 359 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 MAPRE2Q15555 327 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 NRF1Q16656 503 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 HADHQ16836 314 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 NANOGP8Q6NSW7 305 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 SCARA5Q6ZMJ2 495 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF620Q6ZNG0 422 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 LINC00299Q6ZSB3 139 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 LHFPL3Q86UP9 236 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CLVS1Q8IUQ0 354 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PIANPQ8IYJ0 282 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PRR22Q8IZ63 422 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 NATD1Q8N6N6 113 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 METTL13Q8N6R0 699 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF420Q8TAQ5 688 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 ISG20Q96AZ6 181 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CIB1Q99828 191 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 NRIP2Q9BQI9 281 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 C1orf50Q9BV19 199 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 MRPS30Q9NP92 439 aaKnown RBP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CCNB1IP1Q9NPC3 277 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PCYOX1Q9UHG3 505 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 CFL2Q9Y281 166 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.11□□□□□ -1.91
BRCA1-212ENST00000473961 GOLT1BQ9Y3E0 138 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 AP4S1Q9Y587 144 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 MROH2AA6NES4 1674 aa3.11□□□□□ -1.91
BRCA1-212ENST00000473961 PARP4Q9UKK3 1724 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 MRC1P22897 1456 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 C1orf167Q5SNV9 1468 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PPLO60437 1756 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ARHGAP5Q13017 1502 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 ERCC6L2Q5T890 1561 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 TRBV9A0A0B4J1U6 114 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 KBTBD11-OT1A0A1B0GTJ5 212 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 A0A1B0GTQ1 180 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 A0A1W2PQ67 120 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 GOLGA8IPA6NC78 632 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 EVPLLA8MZ36 301 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 MIF4GDA9UHW6 222 aaKnown RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 C12orf77C9JDV5 145 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 H3BNH8 94 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 PHOX2AO14813 284 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 BET1O15155 118 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 POLR1CO15160 346 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-212ENST00000473961 SLC31A2O15432 143 aa3.1□□□□□ -1.91
BRCA1-212ENST00000473961 CHMP2AO43633 222 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms