RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 BCHEP06276 602 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TFPTP0C1Z6 253 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CT62P0C5K7 136 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAM58BPP0C7Q3 252 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GPR89BP0CG08 455 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GIMD1P0DJR0 217 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 C8orf89P0DMQ9 161 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SMIM10L1P0DMW3 83 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR12D1P0DN82 309 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 THRBP10828 461 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 UMPSP11172 480 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TDGF1P13385 188 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 IRF2P14316 349 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GPX2P18283 190 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PRPS1L1P21108 318 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PTNP21246 168 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PCMT1P22061 227 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 IL10P22301 178 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 HIST1H1TP22492 207 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 IGFBP5P24593 272 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ATP5A1P25705 553 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PPP2R1BP30154 601 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RRM2P31350 389 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FMO3P31513 532 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 KDELR2P33947 212 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TGFBR1P36897 503 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TGFBR2P37173 567 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FEN1P39748 380 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PEX19P40855 299 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CRATP43155 626 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SSR2P43308 183 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MAP2K4P45985 399 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 XCR1P46094 333 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RABIFP47224 123 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CAPZBP47756 277 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR1E2P47887 323 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GABRA4P48169 554 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 HSPA13P48723 471 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NCBP2P52298 156 aaKnown RBP eCLIP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF133P52736 654 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LIMK1P53667 647 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PLA2G16P53816 162 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LIM2P55344 173 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GFERP55789 205 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NDUFV3P56181 108 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GABARAPL2P60520 117 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SRP54P61011 504 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ERVK-16P61578 105 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SLC35A2P78381 396 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CDK6Q00534 326 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SPIBQ01892 262 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CHRNB3Q05901 458 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF33BQ06732 778 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PRDX1Q06830 199 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CD47Q08722 323 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MZT1Q08AG7 82 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RBBP4Q09028 425 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RASGEF1BQ0VAM2 473 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MERTKQ12866 999 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PMS2P3Q13401 168 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MED21Q13503 144 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 AQP6Q13520 282 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 C1orf61Q13536 156 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CAMK2DQ13557 499 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAM53BQ14153 422 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FZD2Q14332 565 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LASP1Q14847 261 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MAD2L1BPQ15013 274 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RGNQ15493 299 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SYPL1Q16563 259 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DUSP5Q16690 384 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DUSP7Q16829 419 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 EXOC3L2Q2M3D2 409 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 LRIT3Q3SXY7 679 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 KCTD21Q4G0X4 260 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 IFI44LQ53G44 452 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TOR1AIP1Q5JTV8 583 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 EOGTQ5NDL2 527 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ARMC4Q5T2S8 1044 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CCNJQ5T5M9 372 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CPTPQ5TA50 214 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 KDM4DQ6B0I6 523 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR4C11Q6IEV9 310 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR2T5Q6IEZ7 315 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF770Q6IQ21 691 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 KRT80Q6KB66 452 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SLC48A1Q6P1K1 146 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAHD1Q6P587 224 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ERICH5Q6P6B1 374 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF773Q6PK81 442 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SPESP1Q6UW49 350 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NPSR1Q6W5P4 371 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 WDR88Q6ZMY6 472 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF836Q6ZNA1 936 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DGAT2L6Q6ZPD8 337 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 Q6ZSR6 202 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF621Q6ZSS3 439 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM26Q6ZUK4 368 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CCDC80Q76M96 950 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms