RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RGS6P49758 472 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 ERFP50548 548 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 RASSF2P50749 326 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 TNFAIP6P98066 277 aaPredicted RBP9.84□□□□□ -0.83
CPNE1-222ENST00000473373 AVPI1Q5T686 147 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 MBNL2Q5VZF2 373 aaKnown RBP9.84□□□□□ -0.83
CPNE1-222ENST00000473373 RASSF6Q6ZTQ3 369 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
CPNE1-222ENST00000473373 HIPK1Q86Z02 1210 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 OR5AS1Q8N127 324 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 OR6V1Q8N148 313 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 LINC01356Q8N9X3 169 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 OR2T33Q8NG76 320 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 OR2Z1Q8NG97 314 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 OR9Q1Q8NGQ5 310 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 OR6K6Q8NGW6 343 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 CCL17Q92583 94 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
CPNE1-222ENST00000473373 CMBLQ96DG6 245 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 MSI2Q96DH6 328 aaKnown RBP9.84□□□□□ -0.83
CPNE1-222ENST00000473373 DIRC2Q96SL1 478 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 CHID1Q9BWS9 393 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 TEX12Q9BXU0 123 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 LPAR2Q9HBW0 351 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 MSL2Q9HCI7 577 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 TBCCD1Q9NVR7 557 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 ARMC1Q9NVT9 282 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 TREM2Q9NZC2 230 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 ZDHHC8Q9ULC8 765 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 BAIAP2Q9UQB8 552 aa9.84□□□□□ -0.83
CPNE1-222ENST00000473373 IGLV1-36A0A0B4J1U3 117 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 OR6C68A6NDL8 312 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 TVP23AA6NH52 213 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 AQP12BA6NM10 295 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 DCTN6O00399 190 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 DBHP09172 617 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 SPARCP09486 303 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 HOXB6P17509 224 aaKnown RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 SRD5A1P18405 259 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 PCMT1P22061 227 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 PAICSP22234 425 aaKnown RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 TUBG1P23258 451 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 SRP14P37108 136 aaKnown RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 HMGA2P52926 109 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 TMEM33P57088 247 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 SLC3A1Q07837 685 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 MALLQ13021 153 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 RIN1Q13671 783 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 CCDC92Q53HC0 331 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 FAM209AQ5JX71 171 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 IL17RELQ6ZVW7 336 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 AQP12AQ8IXF9 295 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 ATG16L2Q8NAA4 619 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 SLC26A10Q8NG04 563 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 OR51L1Q8NGJ5 315 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 CANT1Q8WVQ1 401 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 HPS1Q92902 700 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 RAB1CQ92928 201 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 YIPF5Q969M3 257 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 APOBEC3DQ96AK3 386 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 RAB39BQ96DA2 213 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 PLEKHA8Q96JA3 519 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 DCLRE1CQ96SD1 692 aaKnown RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 COQ7Q99807 217 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 ATF6BQ99941 703 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 HCAR1Q9BXC0 346 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 PLA2G12AQ9BZM1 189 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 TUBG2Q9NRH3 451 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 NKIRAS2Q9NYR9 191 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 PDP1Q9P0J1 537 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 PURGQ9UJV8 347 aaKnown RBP9.83□□□□□ -0.84
CPNE1-222ENST00000473373 N6AMT1Q9Y5N5 214 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 LHFPL6Q9Y693 200 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 DOCK11Q5JSL3 2073 aa9.83□□□□□ -0.84
CPNE1-222ENST00000473373 ATRQ13535 2644 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 SURF4O15260 269 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 LILRA1O75019 489 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 IGHV1-46P01743 117 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 TFP02787 698 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 LCATP04180 440 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 GYPBP06028 91 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 TACSTD2P09758 323 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 GAAP10253 952 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 TNFRSF1AP19438 455 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 FMO3P31513 532 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 IL2RGP31785 369 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 RAD23AP54725 363 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 TPTEP56180 551 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 MRPS11P82912 194 aaKnown RBP9.82□□□□□ -0.84
CPNE1-222ENST00000473373 CBX1P83916 185 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 DBPQ10586 325 aaPredicted RBP9.82□□□□□ -0.84
CPNE1-222ENST00000473373 PSG7Q13046 419 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 GK3PQ14409 553 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 KCNMB1Q16558 191 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 SHQ1Q6PI26 577 aaKnown RBP9.82□□□□□ -0.84
CPNE1-222ENST00000473373 GLCCI1Q86VQ1 547 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 PHC2Q8IXK0 858 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 SLC37A3Q8NCC5 494 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 BHLHE23Q8NDY6 225 aa9.82□□□□□ -0.84
CPNE1-222ENST00000473373 OR4C15Q8NGM1 316 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms