RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PCYOX1LQ8NBM8 494 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 OR4F17Q8NGA8 305 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 OR6T1Q8NGN1 323 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 OR2T6Q8NHC8 308 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.57
SMURF1-203ENST00000472627 OR4F4Q96R69 305 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 ZNF426Q9BUY5 554 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 SIRPDQ9H106 197 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 PPA2Q9H2U2 334 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 TXNIPQ9H3M7 391 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 POFUT1Q9H488 388 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 TMEM100Q9NV29 134 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 ZNRD1Q9P1U0 126 aa11.52□□□□□ -0.57
SMURF1-203ENST00000472627 A6NIZ1 184 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 F5H5P2 479 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 UBDO15205 165 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 OR7A10O76100 309 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 MPIG6BO95866 241 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 RBM34P42696 430 aaKnown RBP11.51□□□□□ -0.57
SMURF1-203ENST00000472627 GATA4P43694 442 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 RAP1BP61224 184 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 STX1BP61266 288 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 ARF6P62330 175 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 RAP1AP62834 184 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 TOP3AQ13472 1001 aaPredicted RBP11.51□□□□□ -0.57
SMURF1-203ENST00000472627 FAM201AQ5SY85 155 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 OR2T2Q6IF00 324 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 FBXW12Q6X9E4 464 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 CMTM4Q8IZR5 234 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 Q8TCH9 128 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 PHF21AQ96BD5 680 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 SGTBQ96EQ0 304 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 HCAR1Q9BXC0 346 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 CENPHQ9H3R5 247 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 TMCC3Q9ULS5 477 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 NOP16Q9Y3C1 178 aaKnown RBP11.51□□□□□ -0.57
SMURF1-203ENST00000472627 KPTNQ9Y664 436 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 TENM3Q9P273 2699 aa11.51□□□□□ -0.57
SMURF1-203ENST00000472627 IGKV1D-43A0A0B4J1Z2 117 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 TRAV38-1A0A0B4J264 116 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 IGHV3-64DA0A0J9YX35 117 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 ADAM20O43506 726 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 IGF2P01344 180 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 FPR3P25089 353 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 COX10Q12887 443 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 ENDOGQ14249 297 aaKnown RBP11.5□□□□□ -0.57
SMURF1-203ENST00000472627 CDONQ4KMG0 1287 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 ALG10Q5BKT4 473 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 LRIF1Q5T3J3 769 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 PDZD9Q8IXQ8 264 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 KLHDC1Q8N7A1 406 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 C11orf44Q8N8P7 122 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 C11orf65Q8NCR3 313 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 SLC26A7Q8TE54 656 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 CFHR4Q92496 578 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 CLPTM1LQ96KA5 538 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 WFDC6Q9BQY6 131 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 FN3KRPQ9HA64 309 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 RAB18Q9NP72 206 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 POLE4Q9NR33 117 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 PTTG3PQ9NZH4 202 aa11.5□□□□□ -0.57
SMURF1-203ENST00000472627 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 LGALS8O00214 317 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 FBP2O00757 339 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 ERFP50548 548 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 RAD23AP54725 363 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 RPL27P61353 136 aaKnown RBP11.49□□□□□ -0.57
SMURF1-203ENST00000472627 AQP6Q13520 282 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 OR8B8Q15620 311 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 C11orf87Q6NUJ2 197 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 VMO1Q7Z5L0 202 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 BHLHE23Q8NDY6 225 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 OR9I1Q8NGQ6 314 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 RASSF5Q8WWW0 418 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 APOBEC3DQ96AK3 386 aaPredicted RBP11.49□□□□□ -0.57
SMURF1-203ENST00000472627 CPPED1Q9BRF8 314 aaPredicted RBP11.49□□□□□ -0.57
SMURF1-203ENST00000472627 FAM234AQ9H0X4 552 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 TOR3AQ9H497 397 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 CNTD2Q9H8S5 307 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 SSU72Q9NP77 194 aaKnown RBP11.49□□□□□ -0.57
SMURF1-203ENST00000472627 MEPEQ9NQ76 525 aaPredicted RBP11.49□□□□□ -0.57
SMURF1-203ENST00000472627 RNF7Q9UBF6 113 aa11.49□□□□□ -0.57
SMURF1-203ENST00000472627 NOTCH3Q9UM47 2321 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 OR6C6A6NF89 314 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 MLNRO43193 412 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 FAM20BO75063 409 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 LYPD3O95274 346 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 KITP10721 976 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 KIR2DS4P43632 304 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 EFNB2P52799 333 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 DUSP7Q16829 419 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 CYP51A1Q16850 503 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 METAP1DQ6UB28 335 aaPredicted RBP11.48□□□□□ -0.57
SMURF1-203ENST00000472627 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 MOSPD2Q8NHP6 518 aa11.48□□□□□ -0.57
SMURF1-203ENST00000472627 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms