RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ZNF488Q96MN9 340 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 TBL1YQ9BQ87 522 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 LZTS2Q9BRK4 669 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 TM2D3Q9BRN9 247 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 RACGAP1Q9H0H5 632 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 OR51M1Q9H341 326 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 METTL7AQ9H8H3 244 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 ENOPH1Q9UHY7 261 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 VANGL2Q9ULK5 521 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 KCNE3Q9Y6H6 103 aa1.27□□□□□ -2.21
RBM39-228ENST00000471635 HELZ2Q9BYK8 2649 aaKnown RBP1.27□□□□□ -2.21
RBM39-228ENST00000471635 IGHV1OR15-9A0A0B4J2B8 117 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 FAM47DPA6NHR8 397 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 L7N2F9 121 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 RAB29O14966 203 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 NUPL2O15504 423 aaKnown RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 NDUFB10O96000 172 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 CRYGBP07316 175 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 CD3GP09693 182 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 OR8U9P0C7N5 309 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 SLC2A3P11169 496 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 NCF2P19878 526 aaPredicted RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 F2RP25116 425 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 CHMLP26374 656 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 TMED10P49755 219 aaKnown RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 UBE2NP61088 152 aaKnown RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 ADARB1P78563 741 aaKnown RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 OR7A5Q15622 319 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 ZNF726P1Q15940 193 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 AVPI1Q5T686 147 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 RNASEKQ6P5S7 137 aaKnown RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 SMARCD3Q6STE5 483 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 TMEM107Q6UX40 140 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 CASP12Q6UXS9 341 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 Q6ZS52 159 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 ARL6IP6Q8N6S5 226 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 PRELID2Q8N945 189 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 APCDD1LQ8NCL9 501 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 SPATA4Q8NEY3 305 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 OR9K2Q8NGE7 335 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 OR13C2Q8NGS9 318 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 KIFAP3Q92845 792 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 PTX4Q96A99 478 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 OR5B12Q96R08 314 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 SLC29A1Q99808 456 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 SLC38A10Q9HBR0 1119 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 TMEM9BQ9NQ34 198 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 SLC2A8Q9NY64 477 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 PSMC3IPQ9P2W1 217 aaPredicted RBP1.26□□□□□ -2.21
RBM39-228ENST00000471635 SIGLEC7Q9Y286 467 aa1.26□□□□□ -2.21
RBM39-228ENST00000471635 AKNAQ7Z591 1439 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 DENND4AQ7Z401 1863 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 CENPVL3A0A0U1RRI6 287 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 LRRIQ3A6PVS8 624 aaPredicted RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 KLHL41O60662 606 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 REM1O75628 298 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 CTSLP07711 333 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 ANXA5P08758 320 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 RAB3AP20336 220 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 WARSP23381 471 aaKnown RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 NAA10P41227 235 aaPredicted RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 CSNK1EP49674 416 aaKnown RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 FUT5Q11128 374 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 DDX39BQ13838 428 aaKnown RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 ZNF235Q14590 738 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 RBMY1FQ15415 496 aaKnown RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 CDR2LQ86X02 465 aaPredicted RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 NPWQ8N729 165 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 OR2A1Q8NGT9 310 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 KCNG3Q8TAE7 436 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 FBXO32Q969P5 355 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 STACQ99469 402 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 FGF23Q9GZV9 251 aaPredicted RBP1.25□□□□□ -2.21
RBM39-228ENST00000471635 EDA2RQ9HAV5 297 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 C8orf17Q9NRJ1 99 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 TMCC3Q9ULS5 477 aa1.25□□□□□ -2.21
RBM39-228ENST00000471635 USP47Q96K76 1375 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 IGKV1-8A0A0C4DH67 115 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 TMEM120BA0PK00 339 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 OR6C74A6NCV1 312 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 PALMO75781 387 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 EIF4EP06730 217 aaKnown RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 ACSM4P0C7M7 580 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 ATF6P18850 670 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 TNNI1P19237 187 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 LOXP28300 417 aaPredicted RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 FOXN2P32314 431 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 HCAR3P49019 387 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 P2RX1P51575 399 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 CDKN2DP55273 166 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 PRMT2P55345 433 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 VSX2P58304 361 aaPredicted RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 ACTR3P61158 418 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 CRADDP78560 199 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 PRR3P79522 188 aaKnown RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 CHRNA6Q15825 494 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 CEP55Q53EZ4 464 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 MPV17L2Q567V2 206 aa1.24□□□□□ -2.21
RBM39-228ENST00000471635 RNASE13Q5GAN3 156 aaKnown RBP1.24□□□□□ -2.21
RBM39-228ENST00000471635 SOHLH1Q5JUK2 328 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms