RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PF4P02776 101 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SERPINE1P05121 402 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 VIMP08670 466 aaKnown RBP5.66□□□□□ -1.5
HDAC1-204ENST00000471488 CST2P09228 141 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 NR2C1P13056 603 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 ETS2P15036 469 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 FUT1P19526 365 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 MSR1P21757 451 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 CPT2P23786 658 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 HOXD3P31249 432 aaPredicted RBP5.66□□□□□ -1.5
HDAC1-204ENST00000471488 PMELP40967 661 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 CENPAP49450 140 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 NPY4RP50391 375 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 RAD23AP54725 363 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 UGT2B15P54855 530 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 CDK6Q00534 326 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 EMX1Q04741 257 aaPredicted RBP5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SCARB2Q14108 478 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 DOC2BQ14184 412 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 LAPTM4AQ15012 233 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 KCNJ8Q15842 424 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 HIST3H3Q16695 136 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 C10orf128Q5T292 105 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 FAM27BQ5VT28 67 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF841Q6ZN19 808 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 LNX2Q8N448 690 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 GOLGA6L1Q8N7Z2 621 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 OR8G5Q8NG78 346 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 OR51G2Q8NGK0 314 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 OR9I1Q8NGQ6 314 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 PFN4Q8NHR9 129 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 PPP1R35Q8TAP8 253 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SLC26A7Q8TE54 656 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 CFHR4Q92496 578 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 H1FXQ92522 213 aaKnown RBP5.66□□□□□ -1.5
HDAC1-204ENST00000471488 PTP4A1Q93096 173 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 DACT3Q96B18 629 aaPredicted RBP5.66□□□□□ -1.5
HDAC1-204ENST00000471488 HAVCR1Q96D42 359 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 OCSTAMPQ9BR26 566 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 C20orf27Q9GZN8 174 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SIRPDQ9H106 197 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 PPCSQ9HAB8 311 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 BCL2L10Q9HD36 194 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 SLCO1B3Q9NPD5 702 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 TMEM100Q9NV29 134 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 TBCCD1Q9NVR7 557 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 FBLN5Q9UBX5 448 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 POLR1DQ9Y2S0 133 aa5.66□□□□□ -1.5
HDAC1-204ENST00000471488 A0A1B0GVI7 797 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 GMNCA6NCL1 334 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 A6NLC8 198 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 E9PQ18 207 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 RNASEK-C17orf49H0YIS7 233 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 DVL1O14640 695 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 NPFFO15130 113 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 MLNRO43193 412 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 PPP1R3DO95685 299 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 GRPP07492 148 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 DBHP09172 617 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 ZCCHC18P0CG32 403 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 RAC2P15153 192 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 CD247P20963 164 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 BGNP21810 368 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 PAX6P26367 422 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 POU1F1P28069 291 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 SAA4P35542 130 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 POLR2JP52435 117 aaKnown RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 EFNB2P52799 333 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 GMFBP60983 142 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 SCRN3Q0VDG4 424 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 FADDQ13158 208 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 STX3Q13277 289 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 IKZF1Q13422 519 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 ENDOGQ14249 297 aaKnown RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 HABP2Q14520 560 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 OR8G1Q15617 311 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 MPPED2Q15777 294 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 PLA1AQ53H76 456 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 KHDC1LQ5JSQ8 128 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 BEND6Q5SZJ8 279 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 SWT1Q5T5J6 900 aaKnown RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF613Q6PF04 617 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 CALHM3Q86XJ0 350 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 RBM45Q8IUH3 476 aaKnown RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 MICU2Q8IYU8 434 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 CMTM4Q8IZR5 234 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 FGFRL1Q8N441 504 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 OR5L1Q8NGL2 311 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 OR6T1Q8NGN1 323 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 OR5R1Q8NH85 324 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 ADAMTS16Q8TE57 1224 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 RORBQ92753 470 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 SGTBQ96EQ0 304 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 COG8Q96MW5 612 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 SSX3Q99909 188 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 CITED2Q99967 270 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 ECSITQ9BQ95 431 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 CPPED1Q9BRF8 314 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 DCTN5Q9BTE1 182 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 HCAR1Q9BXC0 346 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms