RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FGD2Q7Z6J4 655 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 KRT77Q7Z794 578 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 CCDC36Q8IYA8 594 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 UBQLNLQ8IYU4 475 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 YIPF7Q8N8F6 280 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 OR2G2Q8NGZ5 317 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 ABHD4Q8TB40 342 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 GPR148Q8TDV2 347 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 C11orf40Q8WZ69 217 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 NSMAFQ92636 917 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 WNT2BQ93097 391 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 GMPPAQ96IJ6 420 aaPredicted RBP8.06□□□□□ -1.12
PTPRE-207ENST00000471218 BOD1Q96IK1 185 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 ZFP3Q96NJ6 502 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF385AQ96PM9 386 aaKnown RBP8.06□□□□□ -1.12
PTPRE-207ENST00000471218 EMC6Q9BV81 110 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 WDR12Q9GZL7 423 aaKnown RBP8.06□□□□□ -1.12
PTPRE-207ENST00000471218 HDHD2Q9H0R4 259 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 SLCO5A1Q9H2Y9 848 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 EXO5Q9H790 373 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 SP140LQ9H930 580 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 CALHM2Q9HA72 323 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 EXOSC4Q9NPD3 245 aaKnown RBP8.06□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF391Q9UJN7 358 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 TINAGQ9UJW2 476 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 ING1Q9UK53 422 aaPredicted RBP8.06□□□□□ -1.12
PTPRE-207ENST00000471218 IKZF2Q9UKS7 526 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 POLR1DQ9Y2S0 133 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 NOSIPQ9Y314 301 aaKnown RBP8.06□□□□□ -1.12
PTPRE-207ENST00000471218 R4GMQ9 66 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 PCNX3Q9H6A9 2034 aa8.06□□□□□ -1.12
PTPRE-207ENST00000471218 GTF3C1Q12789 2109 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 EML6Q6ZMW3 1958 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TRBV5-5A0A0J9YX44 114 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 CD8B2A6NJW9 211 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 OR4C45A6NMZ5 311 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 FAM171A2A8MVW0 826 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 SS18L1O75177 396 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 FARS2O95363 451 aaKnown RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 OPN1LWP04000 364 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 CD8BP10966 210 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF12P17014 697 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ACHEP22303 614 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 PAX7P23759 505 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 OTX1P32242 354 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 CD79BP40259 229 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 STARP49675 285 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 SCAND1P57086 179 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 PSMA6P60900 246 aaKnown RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ETFDHQ16134 617 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 Q499Y3 187 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ZMAT1Q5H9K5 638 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 RNFT1Q5M7Z0 435 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TMEM244Q5VVB8 128 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 MEX3BQ6ZN04 569 aaKnown RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TMEM91Q6ZNR0 172 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 DCXRQ7Z4W1 244 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ACBD4Q8NC06 268 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 OR5AK2Q8NH90 309 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 MCFD2Q8NI22 146 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TBC1D15Q8TC07 691 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 THEM6Q8WUY1 208 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 RNF166Q96A37 237 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 NABP1Q96AH0 204 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 WDFY2Q96P53 400 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TM9SF2Q99805 663 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TMED9Q9BVK6 235 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 PRRG4Q9BZD6 226 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 RERGLQ9H628 205 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ELOVL3Q9HB03 270 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 MOV10Q9HCE1 1003 aaKnown RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 KCNJ16Q9NPI9 418 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 TMEM38BQ9NVV0 291 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 CLCF1Q9UBD9 225 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 RABL2AQ9UBK7 228 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 MALT1Q9UDY8 824 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 KCNN3Q9UGI6 736 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
PTPRE-207ENST00000471218 RABL2BQ9UNT1 228 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 KLHDC2Q9Y2U9 406 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 LHFPL6Q9Y693 200 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 ABCA2Q9BZC7 2435 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 CACNA1CQ13936 2221 aa8.05□□□□□ -1.12
PTPRE-207ENST00000471218 IGKV1D-43A0A0B4J1Z2 117 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 A0A1W2PPL8 197 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 DHRS7CA6NNS2 312 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 CLDN25C9JDP6 229 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 ZNF587BE7ETH6 402 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 E9PI62 339 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 H0YC42 278 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 PDCD5O14737 125 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 WDR1O75083 606 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 SRSF10O75494 262 aaKnown RBP8.04□□□□□ -1.12
PTPRE-207ENST00000471218 ZFPL1O95159 310 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 CD2P06729 351 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 INHBBP09529 407 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 H2BFMP0C1H6 154 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 OR8G3PP0DMU2 310 aa8.04□□□□□ -1.12
PTPRE-207ENST00000471218 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms