RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 HSPE1-MOB4S4R3N1 261 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 ALPK2Q86TB3 2170 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 A0A1W2PRX2 142 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 UBE2QL1A1L167 161 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 A6NIZ1 184 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 PRSS47A8MTI9 375 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 H3BUI4 141 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 BOLA2-SMG1P6H3BVE0 249 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SLC43A1O75387 559 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SEC14L2O76054 403 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 PTHP01270 115 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 IFNGP01579 166 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 TFP02787 698 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF182P17025 639 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 BMP5P22003 454 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 CDAP32320 146 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SLC15A1P46059 708 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 OR3A2P47893 321 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 CSNK1A1P48729 337 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SLC25A1P53007 311 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 CDH11P55287 796 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 CLRN1P58418 232 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 RAP1BP61224 184 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 RAP1AP62834 184 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 ADORA2A-AS1P86434 159 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF91Q05481 1191 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SPCS2Q15005 226 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SF3B4Q15427 424 aaKnown RBP eCLIP4.14□□□□□ -1.758e-8■■■■□ 21.8
SF3B1-208ENST00000470268 MEP1BQ16820 701 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 TMEM95Q3KNT9 176 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 KLHL12Q53G59 568 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 THEM4Q5T1C6 240 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 C10orf128Q5T292 105 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 C9orf135Q5VTT2 229 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 FAM205BPQ63HN1 556 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 OR2A2Q6IF42 318 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SLC25A47Q6Q0C1 308 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SLC16A12Q6ZSM3 486 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SHFQ7M4L6 423 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 FJX1Q86VR8 437 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 GABRG1Q8N1C3 465 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 RELL2Q8NC24 303 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SETD9Q8NE22 299 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 OR6K3Q8NGY3 331 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 OR6N1Q8NGY5 312 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 NSMAFQ92636 917 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 MUL1Q969V5 352 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 NABP1Q96AH0 204 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 APH1AQ96BI3 265 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 ZMYND19Q96E35 227 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 PLEKHA8Q96JA3 519 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 ALG12Q9BV10 488 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 FUNDC2Q9BWH2 189 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 PRRG3Q9BZD7 231 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 NDEL1Q9GZM8 345 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 OPN3Q9H1Y3 402 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SLCO5A1Q9H2Y9 848 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 RNF167Q9H6Y7 350 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 WDR76Q9H967 626 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 GPR35Q9HC97 309 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 VCX3AQ9NNX9 186 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 PLSCR4Q9NRQ2 329 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 MRPL22Q9NWU5 206 aaKnown RBP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 DCAF16Q9NXF7 216 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 MALT1Q9UDY8 824 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 WARS2Q9UGM6 360 aaKnown RBP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 CLEC2DQ9UHP7 191 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.14□□□□□ -1.75
SF3B1-208ENST00000470268 FKBP7Q9Y680 259 aa4.14□□□□□ -1.75
SF3B1-208ENST00000470268 SVILO95425 2214 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 TVP23AA6NH52 213 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 CENPBD1B2RD01 187 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 B5MCH6 92 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 RPL36A-HNRNPH2H7BZ11 118 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 CCL21O00585 134 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 DHHO43323 396 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 HOXA3O43365 443 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-208ENST00000470268 MPZL2O60487 215 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 RENP00797 406 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 ITGA5P08648 1049 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 DBTP11182 482 aaKnown RBP4.13□□□□□ -1.75
SF3B1-208ENST00000470268 IGHV1-2P23083 117 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 DCKP27707 260 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 PSMB9P28065 219 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 HTR1FP30939 366 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 LIPAP38571 399 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 CD79BP40259 229 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 HCCSP53701 268 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 TSC22D1Q15714 1073 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 CEACAM16Q2WEN9 425 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 RIPPLY2Q5TAB7 128 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 MEDAGQ5VYS4 303 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 FBXW9Q5XUX1 488 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF474Q6S9Z5 364 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-208ENST00000470268 MEPCEQ7L2J0 689 aaKnown RBP4.13□□□□□ -1.75
SF3B1-208ENST00000470268 TIGD4Q8IY51 512 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF100Q8IYN0 542 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 UBE2J2Q8N2K1 259 aa4.13□□□□□ -1.75
SF3B1-208ENST00000470268 GPR137CQ8N3F9 429 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms