RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 CMC2Q9NRP2 79 aa13.19□□□□□ -0.3
FDPS-208ENST00000470171 MYEF2Q9P2K5 600 aaKnown RBP13.19□□□□□ -0.3
FDPS-208ENST00000470171 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
FDPS-208ENST00000470171 KCNS2Q9ULS6 477 aa13.19□□□□□ -0.3
FDPS-208ENST00000470171 NOP16Q9Y3C1 178 aaKnown RBP13.19□□□□□ -0.3
FDPS-208ENST00000470171 GRIP1Q9Y3R0 1128 aa13.19□□□□□ -0.3
FDPS-208ENST00000470171 LHFPL6Q9Y693 200 aa13.19□□□□□ -0.3
FDPS-208ENST00000470171 IGHV1-69-2A0A0G2JMI3 117 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 INAFM1C9JVW0 142 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 H3BN98 237 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 DCTN6O00399 190 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 RER1O15258 196 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 TPD52L2O43399 206 aaKnown RBP13.18□□□□□ -0.3
FDPS-208ENST00000470171 FKBP6O75344 327 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 MPZL1O95297 269 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 IGHV4-31P0DP07 118 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 FCGR1AP12314 374 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 HNF1AP20823 631 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 THBS2P35442 1172 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 TPTEP56180 551 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 ERVS71-1P61550 626 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 CBX1P83916 185 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 MALLQ13021 153 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 MAD2L1BPQ15013 274 aaPredicted RBP13.18□□□□□ -0.3
FDPS-208ENST00000470171 PCK2Q16822 640 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 CHRFAM7AQ494W8 412 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 ZNF362Q5T0B9 420 aaPredicted RBP13.18□□□□□ -0.3
FDPS-208ENST00000470171 SLC35F1Q5T1Q4 408 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 SLC18B1Q6NT16 456 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 RFPL4BQ6ZWI9 263 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 MAPK1IP1LQ8NDC0 245 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 SDR9C7Q8NEX9 313 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 RAB1CQ92928 201 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 TSSK2Q96PF2 358 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 PITX2Q99697 317 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 RBM4Q9BWF3 364 aaKnown RBP13.18□□□□□ -0.3
FDPS-208ENST00000470171 OR51B6Q9H340 312 aa13.18□□□□□ -0.3
FDPS-208ENST00000470171 PDP1Q9P0J1 537 aaPredicted RBP13.18□□□□□ -0.3
FDPS-208ENST00000470171 NSD1Q96L73 2696 aaPredicted RBP13.17□□□□□ -0.3
FDPS-208ENST00000470171 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 TIMM8AO60220 97 aaPredicted RBP13.17□□□□□ -0.3
FDPS-208ENST00000470171 LILRA1O75019 489 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 NGFP01138 241 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 HPXP02790 462 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 OSMP13725 252 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 GGT2P36268 569 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 SLC15A1P46059 708 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 PSG7Q13046 419 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 KRTAP27-1Q3LI81 207 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 COLCA1Q6ZS62 124 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 LINC01356Q8N9X3 169 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 SLC37A3Q8NCC5 494 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 ITFG2Q969R8 447 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 HCAR1Q9BXC0 346 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 C1QTNF5Q9BXJ0 243 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 CADM1Q9BY67 442 aaKnown RBP13.17□□□□□ -0.3
FDPS-208ENST00000470171 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 NMNAT2Q9BZQ4 307 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
FDPS-208ENST00000470171 PURGQ9UJV8 347 aaKnown RBP13.17□□□□□ -0.3
FDPS-208ENST00000470171 LOC100289279A0A1B0GTE1 492 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 B4DSR2 109 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 LMX1BO60663 402 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 CCL8P80075 99 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
FDPS-208ENST00000470171 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 SHFQ7M4L6 423 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 OR8D4Q8NGM9 314 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 OR13G1Q8NGZ3 307 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 CMBLQ96DG6 245 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 DUS3LQ96G46 650 aaKnown RBP13.16□□□□□ -0.3
FDPS-208ENST00000470171 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
FDPS-208ENST00000470171 PLA2G12AQ9BZM1 189 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 TOR3AQ9H497 397 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 ZNF275Q9NSD4 429 aaPredicted RBP13.16□□□□□ -0.3
FDPS-208ENST00000470171 DDX28Q9NUL7 540 aaKnown RBP13.16□□□□□ -0.3
FDPS-208ENST00000470171 ARMC1Q9NVT9 282 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 STARD10Q9Y365 291 aa13.16□□□□□ -0.3
FDPS-208ENST00000470171 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
FDPS-208ENST00000470171 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
FDPS-208ENST00000470171 RP2O75695 350 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 IGHV1-46P01743 117 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 COL8A2P25067 703 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 MPV17P39210 176 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 MAGEB1P43366 347 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 ENTPD1P49961 510 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 SPATA46Q5T0L3 261 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 PARP8Q8N3A8 854 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 ATG16L2Q8NAA4 619 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 RAB39BQ96DA2 213 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 BEX2Q9BXY8 128 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 VNN3Q9NY84 501 aa13.15□□□□□ -0.3
FDPS-208ENST00000470171 PRODHO43272 600 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms