RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TPRA1Q86W33 373 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 TSEN15Q8WW01 171 aaKnown RBP18.07■□□□□ 0.48
TMEM53-207ENST00000468117 PHYHIPQ92561 330 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 TMEM106AQ96A25 262 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 SLC25A18Q9H1K4 315 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 HMG20AQ9NP66 347 aa18.07■□□□□ 0.48
TMEM53-207ENST00000468117 DDX28Q9NUL7 540 aaKnown RBP18.07■□□□□ 0.48
TMEM53-207ENST00000468117 RP1L1Q8IWN7 2480 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-207ENST00000468117 CRYABP02511 175 aaKnown RBP18.06■□□□□ 0.48
TMEM53-207ENST00000468117 CST2P09228 141 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 SLC2A1P11166 492 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 PSMA6P60900 246 aaKnown RBP18.06■□□□□ 0.48
TMEM53-207ENST00000468117 BTLAQ7Z6A9 289 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 FGD2Q7Z6J4 655 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 GCNT2Q8N0V5 402 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 MFSD4AQ8N468 514 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 S100ZQ8WXG8 99 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 GMPPAQ96IJ6 420 aaPredicted RBP18.06■□□□□ 0.48
TMEM53-207ENST00000468117 ATF6BQ99941 703 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 NIPAL2Q9H841 368 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 GP6Q9HCN6 339 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 PLEK2Q9NYT0 353 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 N6AMT1Q9Y5N5 214 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 RPL36A-HNRNPH2H7BZ11 118 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 FAM87AP0C7U9 286 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 RAB3BP20337 219 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 MAPK3P27361 379 aaPredicted RBP18.06■□□□□ 0.48
TMEM53-207ENST00000468117 FAPQ12884 760 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 ELFN2Q5R3F8 820 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 SKA3Q8IX90 412 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 AP3S1Q92572 193 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 PBOV1Q9GZY1 135 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 SLC24A3Q9HC58 644 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 PRSS50Q9UI38 385 aa18.06■□□□□ 0.48
TMEM53-207ENST00000468117 INTS1Q8N201 2190 aaKnown RBP18.06■□□□□ 0.48
TMEM53-207ENST00000468117 A0A0G2JK05 382 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 OR14I1A6ND48 311 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 C1QTNF9BB2RNN3 333 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 C1QTNF9P0C862 333 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 CX3CR1P49238 355 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF121P58317 390 aaPredicted RBP18.05■□□□□ 0.48
TMEM53-207ENST00000468117 GRB2P62993 217 aaKnown RBP18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ARF1P84077 181 aaKnown RBP18.05■□□□□ 0.48
TMEM53-207ENST00000468117 DYNC1I2Q13409 638 aaKnown RBP18.05■□□□□ 0.48
TMEM53-207ENST00000468117 DCTN2Q13561 401 aaKnown RBP18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF585AQ6P3V2 769 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 LAX1Q8IWV1 398 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 SLC7A6Q92536 515 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 GPR137Q96N19 417 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 AK6Q9Y3D8 172 aaKnown RBP18.05■□□□□ 0.48
TMEM53-207ENST00000468117 TAF4O00268 1085 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 P2RY10O00398 339 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 TTRP02766 147 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF32P17041 273 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ANOS1P23352 680 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF846Q147U1 533 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 IDNKQ5T6J7 187 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 SFXN4Q6P4A7 337 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 SLC16A14Q7RTX9 510 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF283Q8N7M2 679 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 FGFBP3Q8TAT2 258 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 KCNJ15Q99712 375 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 PLGRKTQ9HBL7 147 aa18.05■□□□□ 0.48
TMEM53-207ENST00000468117 LOC107986453A0A1B0GWG9 222 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 F5H5K5 113 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 SGCEO43556 437 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 SS18L1O75177 396 aaPredicted RBP18.04■□□□□ 0.48
TMEM53-207ENST00000468117 ISG15P05161 165 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 SLC25A35Q3KQZ1 300 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 ACSF3Q4G176 576 aaPredicted RBP18.04■□□□□ 0.48
TMEM53-207ENST00000468117 CEP78Q5JTW2 689 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 FAM180AQ6UWF9 173 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF704Q6ZNC4 412 aaPredicted RBP18.04■□□□□ 0.48
TMEM53-207ENST00000468117 ELMOD2Q8IZ81 293 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 ASB5Q8WWX0 329 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 WDR12Q9GZL7 423 aaKnown RBP18.04■□□□□ 0.48
TMEM53-207ENST00000468117 ABCB9Q9NP78 766 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 COMMD3Q9UBI1 195 aa18.04■□□□□ 0.48
TMEM53-207ENST00000468117 A0A096LPE4 126 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 TRBV5-7A0A0A0MS05 114 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 A0A1W2PPZ6 126 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 FARS2O95363 451 aaKnown RBP18.03■□□□□ 0.48
TMEM53-207ENST00000468117 ACSM4P0C7M7 580 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 UBCP0CG48 685 aaKnown RBP18.03■□□□□ 0.48
TMEM53-207ENST00000468117 TNFSF8P32971 234 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 RSPO1Q2MKA7 263 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-207ENST00000468117 ZNF774Q6NX45 483 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 NAA40Q86UY6 237 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 Q8NA96 180 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 C9orf106Q8NAJ2 232 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 GLRX2Q9NS18 164 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 NUFIP1Q9UHK0 495 aaKnown RBP18.03■□□□□ 0.48
TMEM53-207ENST00000468117 DAPK2Q9UIK4 370 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 HHLA2Q9UM44 414 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 DHDHQ9UQ10 334 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 CMAHPQ9Y471 501 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 ZGRF1Q86YA3 2104 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 TRAV8-7A0A075B6U6 113 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 AHRRA9YTQ3 701 aa18.03■□□□□ 0.48
TMEM53-207ENST00000468117 DBHP09172 617 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms