RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMEM255AQ5JRV8 349 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 C1orf94Q6P1W5 598 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 LINC00471Q8N535 108 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 GJC3Q8NFK1 279 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 IFT27Q9BW83 186 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 ZNF665Q9H7R5 613 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 HIF1ANQ9NWT6 349 aa16.21■□□□□ 0.19
COL7A1-207ENST00000467985 TRAV20A0A0B4J274 112 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 DHRS12A0PJE2 317 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 FAM157AC9JC47 383 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 MPZL1O95297 269 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 KITLGP21583 273 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 CENPAP49450 140 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 TSPAN31Q12999 210 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 CDK5R2Q13319 367 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 CCDC92Q53HC0 331 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-207ENST00000467985 AVPI1Q5T686 147 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 ACSM5Q6NUN0 579 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 LEG1Q6P5S2 330 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 PEG10Q86TG7 708 aaKnown RBP16.2■□□□□ 0.18
COL7A1-207ENST00000467985 PHC2Q8IXK0 858 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 GNPDA2Q8TDQ7 276 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 CCL17Q92583 94 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 PTP4A1Q93096 173 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 HDHD2Q9H0R4 259 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 PURGQ9UJV8 347 aaKnown RBP16.2■□□□□ 0.18
COL7A1-207ENST00000467985 WIPI2Q9Y4P8 454 aa16.2■□□□□ 0.18
COL7A1-207ENST00000467985 IGLV1-36A0A0B4J1U3 117 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 TCRBV5S2A0A599 114 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 RER1O15258 196 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 HIST1H1CP16403 213 aaKnown RBP16.19■□□□□ 0.18
COL7A1-207ENST00000467985 HMGA2P52926 109 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 HIST1H3AP68431 136 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 TNFAIP6P98066 277 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-207ENST00000467985 SCGB2A2Q13296 93 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 KPNB1Q14974 876 aaKnown RBP16.19■□□□□ 0.18
COL7A1-207ENST00000467985 SLC36A3Q495N2 470 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 HIST2H3PS2Q5TEC6 136 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 LIPNQ5VXI9 398 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 RPL13AP3Q6NVV1 102 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 HIST2H3AQ71DI3 136 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 C10orf67Q8IYJ2 551 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 RFLNBQ8N5W9 214 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 TEX29Q8N6K0 151 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 OR5L1Q8NGL2 311 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 HAVCR1Q96D42 359 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 CMBLQ96DG6 245 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 SAMD8Q96LT4 415 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 TSSK2Q96PF2 358 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 NMNAT3Q96T66 252 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 COQ7Q99807 217 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 MAGIXQ9H6Y5 334 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 MSL2Q9HCI7 577 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 SRA1Q9HD15 236 aaKnown RBP16.19■□□□□ 0.18
COL7A1-207ENST00000467985 B9D1Q9UPM9 204 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 STARD10Q9Y365 291 aa16.19■□□□□ 0.18
COL7A1-207ENST00000467985 SURF4O15260 269 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 RAC2P15153 192 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 TNFRSF1AP19438 455 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 COX10Q12887 443 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 PGBD2Q6P3X8 592 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 ZNF620Q6ZNG0 422 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 ZBTB46Q86UZ6 589 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 OR6V1Q8N148 313 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 OR52L1Q8NGH7 329 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 OR4K13Q8NH42 304 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 SLC7A6Q92536 515 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 YY1AP1Q9H869 796 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 LPAR2Q9HBW0 351 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 LYVE1Q9Y5Y7 322 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 LHFPL6Q9Y693 200 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 CACNG2Q9Y698 323 aa16.18■□□□□ 0.18
COL7A1-207ENST00000467985 DCTN6O00399 190 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 IGHV2-5P01817 119 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 RAP2AP10114 183 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 HOXB6P17509 224 aaKnown RBP16.17■□□□□ 0.18
COL7A1-207ENST00000467985 MAGEA2P43356 314 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 ECH1Q13011 328 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 SHQ1Q6PI26 577 aaKnown RBP16.17■□□□□ 0.18
COL7A1-207ENST00000467985 SLC26A10Q8NG04 563 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 CANT1Q8WVQ1 401 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 STMN2Q93045 179 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 APOBEC3DQ96AK3 386 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-207ENST00000467985 POFUT1Q9H488 388 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 RPRD1BQ9NQG5 326 aaKnown RBP16.17■□□□□ 0.18
COL7A1-207ENST00000467985 CDH10Q9Y6N8 788 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 TANC2Q9HCD6 1990 aa16.17■□□□□ 0.18
COL7A1-207ENST00000467985 ANK2Q01484 3957 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 TCRBV3S1A0A5B6 114 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 TNFRSF11BO00300 401 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 TCF21O43680 179 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 DEAF1O75398 565 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-207ENST00000467985 ACTR3P61158 418 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 MEP1BQ16820 701 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 OTPQ5XKR4 325 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 FBXW12Q6X9E4 464 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-207ENST00000467985 ADGRG5Q8IZF4 528 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 OR2Z1Q8NG97 314 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 GAL3ST1Q99999 423 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms