RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PET100P0DJ07 73 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 HRH1P35367 487 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 MFGE8Q08431 387 aaPredicted RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 HYAL4Q2M3T9 481 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 HOGA1Q86XE5 327 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 KDF1Q8NAX2 398 aaPredicted RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 OR13C3Q8NGS6 347 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 C8orf44Q96CB5 159 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 KTI12Q96EK9 354 aaPredicted RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 S1PR5Q9H228 398 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 DNAJB11Q9UBS4 358 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 FAM96BQ9Y3D0 163 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 HRKO00198 91 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 TAAR5O14804 337 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 HOXC4P09017 264 aaPredicted RBP17.69■□□□□ 0.42
SDF4-205ENST00000465727 S100PP25815 95 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 PMELP40967 661 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 GPR3P46089 330 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 RABIFP47224 123 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 OR10K2Q6IF99 312 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 OR51A2Q8NGJ7 313 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 UBQLN4Q9NRR5 601 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 METTL1Q9UBP6 276 aaKnown RBP17.69■□□□□ 0.42
SDF4-205ENST00000465727 PCDHGA1Q9Y5H4 931 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 CACNA1CQ13936 2221 aa17.69■□□□□ 0.42
SDF4-205ENST00000465727 TRAV20A0A0B4J274 112 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 C2orf74A8MZ97 194 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 H0YIZ8 118 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 PLRG1O43660 514 aaKnown RBP17.68■□□□□ 0.42
SDF4-205ENST00000465727 POU2F2P09086 479 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 SPARCP09486 303 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 HPGDP15428 266 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 CCR4P51679 360 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
SDF4-205ENST00000465727 SPOCK1Q08629 439 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 NNATQ16517 81 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 C2orf27AQ580R0 203 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 FAM76BQ5HYJ3 339 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 PSRC1Q6PGN9 363 aaPredicted RBP17.68■□□□□ 0.42
SDF4-205ENST00000465727 SLC16A13Q7RTY0 426 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 C16orf52Q8NHV5 167 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 PPP1R14AQ96A00 147 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 CPNE2Q96FN4 548 aaPredicted RBP17.68■□□□□ 0.42
SDF4-205ENST00000465727 OR5B2Q96R09 309 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 DHCR7Q9UBM7 475 aaKnown RBP17.68■□□□□ 0.42
SDF4-205ENST00000465727 RHBDD3Q9Y3P4 386 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 LRP12Q9Y561 859 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 KPTNQ9Y664 436 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 PTPRSQ13332 1948 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 KIF26BQ2KJY2 2108 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 PRSS37A4D1T9 235 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 BLACEA4D250 179 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 MT-ND4LP03901 98 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 BTG2P78543 158 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 TMEM244Q5VVB8 128 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 OR52W1Q6IF63 320 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 MAMDC2Q7Z304 686 aaPredicted RBP17.68■□□□□ 0.42
SDF4-205ENST00000465727 GVQW1Q8N7I0 195 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 NIT2Q9NQR4 276 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 R4GMQ9 66 aa17.68■□□□□ 0.42
SDF4-205ENST00000465727 WIPF3A6NGB9 483 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ICOSLGO75144 302 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 FBXO24O75426 580 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 FCGR3AP08637 254 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 AGAP20933 346 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ACTR1BP42025 376 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 WASP42768 502 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 RGS19P49795 217 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ACTR1AP61163 376 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 CD226Q15762 336 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 FAM78AQ5JUQ0 283 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ZNF776Q68DI1 518 aaPredicted RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 NAA40Q86UY6 237 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 OR4D6Q8NGJ1 314 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 OR14C36Q8NHC7 312 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 METTL21AQ8WXB1 218 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 OR1E3Q8WZA6 343 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 TAAR8Q969N4 342 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 HIST1H2BAQ96A08 127 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 C14orf79Q96F83 325 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 DGAT2Q96PD7 388 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 CCDC3Q9BQI4 270 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 TUBA4BQ9H853 241 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 MRPL22Q9NWU5 206 aaKnown RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 TINAGQ9UJW2 476 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 TIMM10BQ9Y5J6 103 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 A0A0C4DFX4 3053 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 TRBV23OR9-2A0A075B6M9 112 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 A0A0J9YY10 115 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 A6NCN8 305 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 CEACAM18A8MTB9 384 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ZNF264O43296 627 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ZNF44P15621 663 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 RCC1P18754 421 aaPredicted RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 LSSP48449 732 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 DVL1P1P54792 670 aaPredicted RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 FUT7Q11130 342 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 EIF2B1Q14232 305 aaKnown RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 ZNF704Q6ZNC4 412 aaPredicted RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 MDGA2Q7Z553 956 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms