RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 LOC101059948A0A1B0GTJ6 334 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 hCG_1807616A0A1W2PRN6 198 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 SHISA8B8ZZ34 492 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 BCKDHBP21953 392 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 BDKRB2P30411 391 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 NKAIN1Q4KMZ8 207 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 B3GNTL1Q67FW5 361 aaPredicted RBP16.35■□□□□ 0.21
SYNE4-204ENST00000465425 RAB12Q6IQ22 244 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 PAPD4Q6PIY7 484 aaKnown RBP16.35■□□□□ 0.21
SYNE4-204ENST00000465425 GSG1LQ6UXU4 331 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 RABEPKQ7Z6M1 372 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 SLAMF6Q96DU3 332 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF107Q9UII5 783 aaPredicted RBP16.35■□□□□ 0.21
SYNE4-204ENST00000465425 GDF2Q9UK05 429 aaPredicted RBP16.35■□□□□ 0.21
SYNE4-204ENST00000465425 LIPT2A6NK58 231 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 ALOX12BO75342 701 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SCO1O75880 301 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 ACSM4P0C7M7 580 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 RAB6AP20340 208 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SORDQ00796 357 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 NFAM1Q8NET5 270 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-204ENST00000465425 COQ8AQ8NI60 647 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SCARB1Q8WTV0 552 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 C11orf40Q8WZ69 217 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 CNTD2Q9H8S5 307 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SERINC1Q9NRX5 453 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 KLK13Q9UKR3 277 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 RAB22AQ9UL26 194 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 RPH3AQ9Y2J0 694 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-204ENST00000465425 IGLV3-12A0A075B6K2 115 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SYT7O43581 403 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 CSN2P05814 226 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF28P17035 718 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 NAGAP17050 411 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 CLVS2Q5SYC1 327 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 NAXDQ8IW45 347 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SLC38A9Q8NBW4 561 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 FAM206AQ9NX38 181 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 ATXN7L1Q9ULK2 861 aaPredicted RBP16.34■□□□□ 0.21
SYNE4-204ENST00000465425 SESN1Q9Y6P5 492 aa16.34■□□□□ 0.21
SYNE4-204ENST00000465425 DISC1C4P0D8 188 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 B3GALNT1O75752 331 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 POU3F2P20265 443 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-204ENST00000465425 ACY1Q03154 408 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 GK2Q14410 553 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF813Q6ZN06 617 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 OR5L2Q8NGL0 311 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 OR6C1Q96RD1 312 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 MFFQ9GZY8 342 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 POLR1DQ9Y2S0 133 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 CD74P04233 296 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 GIMD1P0DJR0 217 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 GPR85P60893 370 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 MEF2DQ14814 521 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 CDNFQ49AH0 187 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 TMEM71Q6P5X7 295 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-204ENST00000465425 CHST4Q8NCG5 386 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 OR4S1Q8NGB4 309 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 OR1J2Q8NGS2 313 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 DNASE2BQ8WZ79 361 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 FAM46BQ96A09 425 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 PBOV1Q9GZY1 135 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 TTYH1Q9H313 450 aaPredicted RBP16.33■□□□□ 0.2
SYNE4-204ENST00000465425 SDHAF3Q9NRP4 125 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 SDHAF2Q9NX18 166 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 SPEF1Q9Y4P9 236 aa16.33■□□□□ 0.2
SYNE4-204ENST00000465425 TOX3O15405 576 aaPredicted RBP16.32■□□□□ 0.2
SYNE4-204ENST00000465425 TTRP02766 147 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 HSD11B1P28845 292 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 NKPD1Q17RQ9 610 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 RNASE10Q5GAN6 216 aaKnown RBP16.32■□□□□ 0.2
SYNE4-204ENST00000465425 ATPAF1Q5TC12 328 aaPredicted RBP16.32■□□□□ 0.2
SYNE4-204ENST00000465425 FAM69BQ5VUD6 431 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 LIN54Q6MZP7 749 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 CD163Q86VB7 1156 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 BEST3Q8N1M1 668 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 SLC22A24Q8N4F4 322 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 STEAP2Q8NFT2 490 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 OR5D14Q8NGL3 314 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 EDAQ92838 391 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 MRGPRX4Q96LA9 322 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 METTL7AQ9H8H3 244 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 CYB5R1Q9UHQ9 305 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 CABIN1Q9Y6J0 2220 aa16.32■□□□□ 0.2
SYNE4-204ENST00000465425 A0A1W2PNV4 684 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 RFPL4AA6NLU0 287 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 RFPL4AL1F8VTS6 287 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 SCRG1O75711 98 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 FOSL2P15408 326 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 RPA2P15927 270 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 LAP3P28838 519 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 EMP2P54851 167 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 CLRN1P58418 232 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 MYBPHQ13203 477 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 NR0B2Q15466 257 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 WDR45BQ5MNZ6 344 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 THEM4Q5T1C6 240 aa16.31■□□□□ 0.2
SYNE4-204ENST00000465425 TMEM65Q6PI78 240 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms