RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ADGRE4PQ86SQ3 457 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 OR13C3Q8NGS6 347 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ARL11Q969Q4 196 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ELSPBP1Q96BH3 223 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ABHD6Q9BV23 337 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC17A5Q9NRA2 495 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 ZFP57Q9NU63 452 aa11.29□□□□□ -0.6
CLCNKA-204ENST00000464764 TRAV20A0A0B4J274 112 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 A6NCN8 305 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 C9JQL5 133 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 RAB27BO00194 218 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 PLRG1O43660 514 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 ICOSLGO75144 302 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 APOC1P02654 83 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 PPICP45877 212 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 SSBP1Q04837 148 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 ELAVL1Q15717 326 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 SMAD2Q15796 467 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 DMRTC1Q5HYR2 192 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 AVPI1Q5T686 147 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 BMFQ96LC9 184 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 DGAT2Q96PD7 388 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 NRSN2Q9GZP1 204 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 ZMAT5Q9UDW3 170 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 PCNX3Q9H6A9 2034 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 XKRYO14609 159 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 MYOGP15173 224 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 ACKR1Q16570 336 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 TEX30Q5JUR7 227 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF776Q68DI1 518 aaPredicted RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 RSC1A1Q92681 617 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 ADOQ96SZ5 270 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 MYOZ1Q9NP98 299 aaPredicted RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 OR5AC2Q9NZP5 309 aa11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-204ENST00000464764 EIF1AYO14602 144 aaKnown RBP11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 TIMP1P01033 207 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 CD2P06729 351 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 PNMTP11086 282 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 TPT1P13693 172 aaKnown RBP11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 IGFBP3P17936 291 aaPredicted RBP11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 ZP2Q05996 745 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC9A3R2Q15599 337 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC18B1Q6NT16 456 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 C8orf44Q96CB5 159 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 RPP25Q9BUL9 199 aaKnown RBP11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 PTGES2Q9H7Z7 377 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 SLC5A6Q9Y289 635 aa11.27□□□□□ -0.6
CLCNKA-204ENST00000464764 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 P2RY10O00398 339 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 SNAPINO95295 136 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 IL2RAP01589 272 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 ABOP16442 354 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 CFPP27918 469 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 CD1CP29017 333 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 RORAP35398 523 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 UNC119Q13432 240 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF585AQ6P3V2 769 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 CATSPERDQ86XM0 798 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 RNF141Q8WVD5 230 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 PRRT1Q99946 306 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 PARP12Q9H0J9 701 aaKnown RBP11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 NUP210LQ5VU65 1888 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 C2orf74A8MZ97 194 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 F8VVB4 439 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 F8VWA3 439 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 NUDT14O95848 222 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 FCARP24071 287 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 BIKQ13323 160 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 ALG11Q2TAA5 492 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 TAF8Q7Z7C8 310 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 FOXRED2Q8IWF2 684 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 OR52N4Q8NGI2 321 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 AQP3Q92482 292 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 NXF5Q9H1B4 397 aaKnown RBP11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 RHOFQ9HBH0 211 aa11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 COA3Q9Y2R0 106 aaPredicted RBP11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 TMEM184BQ9Y519 407 aaPredicted RBP11.27□□□□□ -0.61
CLCNKA-204ENST00000464764 ARPC4-TTLL3A0A0A6YYG9 625 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 TEX13DA0A0J9YY54 714 aaPredicted RBP11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 PRSS37A4D1T9 235 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 COLCA2A8K830 154 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF264O43296 627 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 SGCEO43556 437 aa11.26□□□□□ -0.61
CLCNKA-204ENST00000464764 HLA-DOBP13765 273 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms