RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 A0A1W2PNV4 684 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 CENPXA8MT69 81 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF814B7Z6K7 855 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 LINC01387J3KSC0 135 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 ANXA2P07355 339 aaKnown RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 POU3F2P20265 443 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 RIDAP52758 137 aaKnown RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 CSNK2A1P68400 391 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 SLC35A1P78382 337 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 SF3B4Q15427 424 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 KCTD18Q6PI47 426 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 DNM1P34Q6PK57 102 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 LINGO2Q7L985 606 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 GGNQ86UU5 652 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 SERPINA12Q8IW75 414 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 OR52N5Q8NH56 324 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 TSEN15Q8WW01 171 aaKnown RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
COL5A1-205ENST00000464187 PPP1R14AQ96A00 147 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 PLEKHA1Q9HB21 404 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 B3GAT1Q9P2W7 334 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 FOXJ3Q9UPW0 622 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
COL5A1-205ENST00000464187 URB1O60287 2271 aaKnown RBP12.87□□□□□ -0.35
COL5A1-205ENST00000464187 NCKAP5O14513 1909 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 CENPBD1B2RD01 187 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 K7ENP7 123 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 ACOT7O00154 380 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 EIF1AYO14602 144 aaKnown RBP12.87□□□□□ -0.35
COL5A1-205ENST00000464187 SRSF10O75494 262 aaKnown RBP12.87□□□□□ -0.35
COL5A1-205ENST00000464187 KLK2P20151 261 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 GDNFP39905 211 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 H3F3AP84243 136 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 BCL2L15Q5TBC7 163 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 FAM205BPQ63HN1 556 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 INO80CQ6PI98 192 aaPredicted RBP12.87□□□□□ -0.35
COL5A1-205ENST00000464187 NOXA1Q86UR1 476 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 CATSPERDQ86XM0 798 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 ZADH2Q8N4Q0 377 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 RAB40AQ8WXH6 277 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 C7orf50Q9BRJ6 194 aaKnown RBP12.87□□□□□ -0.35
COL5A1-205ENST00000464187 NUDT15Q9NV35 164 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 MCUBQ9NWR8 336 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 NUBP2Q9Y5Y2 271 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 SPENQ96T58 3664 aaKnown RBP12.87□□□□□ -0.35
COL5A1-205ENST00000464187 KIAA1549Q9HCM3 1950 aa12.87□□□□□ -0.35
COL5A1-205ENST00000464187 TRAV6A0A075B6T7 132 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 AQP7P3A6NL99 342 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 EIF1BO60739 113 aaKnown RBP12.86□□□□□ -0.35
COL5A1-205ENST00000464187 RAMP1O60894 148 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 MT-ND4P03905 459 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 RCVRNP35243 200 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 PTH2RP49190 550 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 SUCLG1P53597 346 aaKnown RBP12.86□□□□□ -0.35
COL5A1-205ENST00000464187 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
COL5A1-205ENST00000464187 SLC10A1Q14973 349 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 PCK2Q16822 640 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 ASPHD2Q6ICH7 369 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 IGFL3Q6UXB1 125 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 GPAT4Q86UL3 456 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 OR52I2Q8NH67 350 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 AKAP1Q92667 903 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL5A1-205ENST00000464187 THRSPQ92748 146 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 HAVCR1Q96D42 359 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 SLC6A15Q9H2J7 730 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 BOD1L1Q8NFC6 3051 aa12.86□□□□□ -0.35
COL5A1-205ENST00000464187 A0A0A6YYJ9 748 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 GABARAPH6UMI1 98 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 TCRBP04435 133 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF823P16415 610 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 CDK2P24941 298 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 GIFP27352 417 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 CCR6P51684 374 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ART1P52961 327 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 BIDP55957 195 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 RAC3P60763 192 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 PMP22Q01453 160 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 PLA2G7Q13093 441 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 DYRK1AQ13627 763 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ZNF239Q16600 458 aaKnown RBP12.85□□□□□ -0.35
COL5A1-205ENST00000464187 NHLRC1Q6VVB1 395 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 LINC00346Q8IVM7 164 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ST7LQ8TDW4 575 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 S100A16Q96FQ6 103 aaKnown RBP12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ADGRG7Q96K78 797 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 SRXN1Q9BYN0 137 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 KLHL13Q9P2N7 655 aa12.85□□□□□ -0.35
COL5A1-205ENST00000464187 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms