RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CDK2AP2O75956 126 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 H6PDO95479 791 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CLDN9O95484 217 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 IGLV1-44P01699 117 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 IL3P08700 152 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 OR4A8P0C604 315 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 STMN1P16949 149 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CALCRP30988 508 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 WNT5AP41221 380 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 ASMTP46597 345 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 FNTAP49354 379 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 RAB10P61026 200 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SELENBP1Q13228 472 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 FASTKD3Q14CZ7 662 aaKnown RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 ZNHIT3Q15649 155 aaPredicted RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 TOMM34Q15785 309 aaPredicted RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 CARTPTQ16568 116 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 ZNF876PQ49A33 203 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 KPRPQ5T749 579 aaPredicted RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 FAM219BQ5XKK7 198 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 FAM91A1Q658Y4 838 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CBLN3Q6UW01 205 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CYS1Q717R9 158 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SLC16A9Q7RTY1 509 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SPATA21Q7Z572 469 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SPATA19Q7Z5L4 167 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 RTN4RL2Q86UN3 420 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 FAM9CQ8IZT9 166 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 ZCCHC24Q8N2G6 241 aaKnown RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 TEX29Q8N6K0 151 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 NUP37Q8NFH4 326 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 OR13C3Q8NGS6 347 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 OR51F2Q8NH61 342 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 OCC1Q8TAD7 63 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 GPR119Q8TDV5 335 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CFAP36Q96G28 342 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 PKP2Q99959 881 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 KATNB1Q9BVA0 655 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 FAIM2Q9BWQ8 316 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 C1QTNF6Q9BXI9 259 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 NTN4Q9HB63 628 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 NMRAL1Q9HBL8 299 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 FARSBQ9NSD9 589 aaKnown RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 MRTO4Q9UKD2 239 aaKnown RBP3.97□□□□□ -1.77
COPS3-204ENST00000462236 GUCA1BQ9UMX6 200 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 PPIAL4AQ9Y536 164 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SORL1Q92673 2214 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CIB4A0PJX0 185 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 FAM159BA6NKW6 160 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 CCT8L1PA6NM43 557 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 GJE1A6NN92 205 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 SYCE1LA8MT33 242 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 NPIPB9F8W1W9 429 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 LYNX1G3V0Z9 82 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 J3QLI3 93 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 RP2O75695 350 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 KCNK2O95069 426 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 PDYNP01213 254 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 IGKV3-15P01624 115 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 IGHV3-9P01782 118 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 VIMP08670 466 aaKnown RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 NUDT17P0C025 328 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 LYNX1P0DP58 116 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 PAX7P23759 505 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 COL8A2P25067 703 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 GABRA3P34903 492 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 MPIP34949 423 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 P2RX1P51575 399 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 MRPS11P82912 194 aaKnown RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 H3F3AP84243 136 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 NAAAQ02083 359 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 ZNF117Q03924 483 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 ASPHD2Q6ICH7 369 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 FAM71E1Q6IPT2 247 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 FAM53AQ6NSI3 398 aaPredicted RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 TMPPEQ6ZT21 453 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 MTERF4Q7Z6M4 381 aaKnown RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 CMC1Q7Z7K0 106 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 MYPOPQ86VE0 399 aaPredicted RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 ZNF100Q8IYN0 542 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 KIRREL3Q8IZU9 778 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 PDIK1LQ8N165 341 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 GATSQ8NAP1 163 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 OR52E4Q8NGH9 312 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 SLC26A7Q8TE54 656 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 C16orf78Q8WTQ4 265 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 GRK7Q8WTQ7 553 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 PIK3R3Q92569 461 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 YIPF5Q969M3 257 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 EXOSC8Q96B26 276 aaKnown RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 APH1AQ96BI3 265 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 SLC38A2Q96QD8 506 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 GLIPR2Q9H4G4 154 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 SLC7A10Q9NS82 523 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 DDX28Q9NUL7 540 aaKnown RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 INTS9Q9NV88 658 aaKnown RBP3.96□□□□□ -1.78
COPS3-204ENST00000462236 PCTPQ9UKL6 214 aa3.96□□□□□ -1.78
COPS3-204ENST00000462236 IGHV4-4A0A075B6R2 117 aa3.95□□□□□ -1.78
COPS3-204ENST00000462236 ARPC4-TTLL3A0A0A6YYG9 625 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms