RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 COL4A2P08572 1712 aa3.22□□□□□ -1.89
UBA3-204ENST00000461522 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.89
UBA3-204ENST00000461522 MYOFQ9NZM1 2061 aa3.21□□□□□ -1.89
UBA3-204ENST00000461522 HELZP42694 1942 aaKnown RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 SPTY2D1-AS1A0A0U1RR47 76 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 FABP12A6NFH5 140 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 IGLON5A6NGN9 336 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 A8MU76 341 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 A8MX80 341 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 PPIAL4DF5H284 164 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 KLRC4-KLRK1H3BQV0 150 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 NME2P1O60361 137 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 NOS1APO75052 506 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 GMNNO75496 209 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SRP72O76094 671 aaKnown RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 HPP00738 406 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CRYGBP07316 175 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CSN3P07498 182 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ZNF806P0C7X5 589 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SAGP10523 405 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 CBR1P16152 277 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ZNF7P17097 686 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 PGAM1P18669 254 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CD22P20273 847 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 PCMT1P22061 227 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 DTYMKP23919 212 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 OTX1P32242 354 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 IER3P46695 156 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CAPZBP47756 277 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 TTPAP49638 278 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ASCL1P50553 236 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CDK9P50750 372 aaKnown RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 ZNF140P52738 457 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 OR2B6P58173 313 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ATP6V0D1P61421 351 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 PITPNAQ00169 270 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SLC34A1Q06495 639 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ILKQ13418 452 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ITIH4Q14624 930 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SLC17A1Q14916 467 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 PON3Q15166 354 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CHI3L2Q15782 390 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 NDUFAF6Q330K2 333 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CMPK2Q5EBM0 449 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SPANXN3Q5MJ09 141 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 C1orf146Q5VVC0 180 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 GPR107Q5VW38 600 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 METTL21CQ5VZV1 264 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 TIGD3Q6B0B8 471 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 EMBQ6PCB8 327 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 GLT6D1Q7Z4J2 308 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 HSD11B1LQ7Z5J1 315 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CROCCP2Q86T23 111 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 KCNMB4Q86W47 210 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 NATD1Q8N6N6 113 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 NECAP1Q8NC96 275 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 OR4D10Q8NGI6 311 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 OR6K2Q8NGY2 324 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 OR4A16Q8NH70 328 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 FBXO25Q8TCJ0 367 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 MCOLN3Q8TDD5 553 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 PYROXD1Q8WU10 500 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 UBTD2Q8WUN7 234 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.21□□□□□ -1.9
UBA3-204ENST00000461522 OTUB1Q96FW1 271 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 COX14Q96I36 57 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 DNAJC1Q96KC8 554 aaKnown RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 BMFQ96LC9 184 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ZNF251Q9BRH9 671 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ATG101Q9BSB4 218 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 WRAP53Q9BUR4 548 aaKnown RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 GPR174Q9BXC1 333 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SLITRK2Q9H156 845 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 OR2AG1Q9H205 316 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 EGLN3Q9H6Z9 239 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 C10orf88Q9H8K7 445 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 CALHM2Q9HA72 323 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 ASCL3Q9NQ33 180 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 USE1Q9NZ43 259 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 NLGN3Q9NZ94 848 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 MYEF2Q9P2K5 600 aaKnown RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 ENOPH1Q9UHY7 261 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 SLC17A4Q9Y2C5 497 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 STARD10Q9Y365 291 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 KNL1Q8NG31 2342 aa3.21□□□□□ -1.9
UBA3-204ENST00000461522 EP300Q09472 2414 aaPredicted RBP3.21□□□□□ -1.9
UBA3-204ENST00000461522 OTOGLQ3ZCN5 2332 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 MUC6Q6W4X9 2439 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 IGHV3-20A0A0C4DH32 117 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 IGHV3-38A0A0C4DH36 116 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 GLYATL1P3A0A0U1RQE8 302 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 NPIPA7E9PJI5 369 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 RNASEK-C17orf49H0YIS7 233 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 SMLR1H3BR10 107 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 CCL24O00175 119 aa3.2□□□□□ -1.9
UBA3-204ENST00000461522 PRMT5O14744 637 aaPredicted RBP3.2□□□□□ -1.9
UBA3-204ENST00000461522 SLC25A14O95258 325 aaPredicted RBP3.2□□□□□ -1.9
UBA3-204ENST00000461522 CPNE6O95741 557 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms