RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RAB3AP20336 220 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 PMCHP20382 165 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 OR1G1P47890 313 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 HCAR3P49019 387 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 SLC11A1P49279 550 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ZNF138P52744 262 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 CLDN18P56856 261 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 DAOAP59103 153 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 SEMG2Q02383 582 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 STK38Q15208 465 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 RSPO1Q2MKA7 263 aaPredicted RBP2.1□□□□□ -2.07
VCL-203ENST00000461383 CAVIN4Q5BKX8 364 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 TSPO2Q5TGU0 170 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ZNF530Q6P9A1 599 aaPredicted RBP2.1□□□□□ -2.07
VCL-203ENST00000461383 LINC00523Q86TU6 105 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 HORMAD1Q86X24 394 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 CMTM8Q8IZV2 173 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 SLC34A3Q8N130 599 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ZNF786Q8N393 782 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 LRRC75AQ8NAA5 344 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 TMEM104Q8NE00 496 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 OR52K1Q8NGK4 314 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ABHD3Q8WU67 409 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 LRRC58Q96CX6 371 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 SEH1LQ96EE3 360 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 WFIKKN1Q96NZ8 548 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 CSPG4P5Q96PW8 444 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 FOXC2Q99958 501 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 LZTS2Q9BRK4 669 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 CALN1Q9BXU9 219 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 SPNS1Q9H2V7 528 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 SLC40A1Q9NP59 571 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ADA2Q9NZK5 511 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 ZNF282Q9UDV7 671 aaPredicted RBP2.1□□□□□ -2.07
VCL-203ENST00000461383 PSG8Q9UQ74 426 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 CHTOPQ9Y3Y2 248 aaKnown RBP2.1□□□□□ -2.07
VCL-203ENST00000461383 WDR62O43379 1518 aa2.1□□□□□ -2.07
VCL-203ENST00000461383 AK9Q5TCS8 1911 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 IGLV1-36A0A0B4J1U3 117 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 IGHV5-51A0A0C4DH38 117 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 NCBP2LA6PVI3 153 aaKnown RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 CENPXA8MT69 81 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 K7EMT4 169 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 NVLO15381 856 aaKnown RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 AQP8O94778 261 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 SCELO95171 688 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 BCHEP06276 602 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 CD3GP09693 182 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 TCP1P17987 556 aaKnown RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 TUBG1P23258 451 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 CDKN2DP55273 166 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 KRTAP10-3P60369 221 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 YWHAEP62258 255 aaKnown RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 DGCR6Q14129 220 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 TFDP2Q14188 446 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 RCAN2Q14206 197 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 GABRA6Q16445 453 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 SNRNP35Q16560 246 aaKnown RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 ORMDL2Q53FV1 153 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 NPSR1Q6W5P4 371 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 FAM92BQ6ZTR7 304 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 UNC93AQ86WB7 457 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 TRAM1L1Q8N609 369 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 Q8N976 141 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 OR11H7Q8NGC8 314 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 OR51F2Q8NH61 342 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 DCPSQ96C86 337 aaKnown RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 NRBF2Q96F24 287 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 DYNLL2Q96FJ2 89 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 GALNT14Q96FL9 552 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 CYYR1Q96J86 154 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 OR2A5Q96R48 311 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 SDHCQ99643 169 aaPredicted RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 TPK1Q9H3S4 243 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 UBE2ZQ9H832 354 aaPredicted RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 MYOZ1Q9NP98 299 aaPredicted RBP2.09□□□□□ -2.07
VCL-203ENST00000461383 MYOZ2Q9NPC6 264 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 LZTFL1Q9NQ48 299 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 TUBG2Q9NRH3 451 aa2.09□□□□□ -2.07
VCL-203ENST00000461383 MN1Q10571 1320 aaPredicted RBP2.09□□□□□ -2.08
VCL-203ENST00000461383 MROH7Q68CQ1 1323 aa2.09□□□□□ -2.08
VCL-203ENST00000461383 CARMIL3Q8ND23 1372 aa2.09□□□□□ -2.08
VCL-203ENST00000461383 DOCK8Q8NF50 2099 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 MEGF6O75095 1541 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 IGLV4-69A0A075B6H9 119 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 IGLV3-16A0A075B6K0 115 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 A0A096LNJ9 63 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 A6NDN8 102 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 H7C1H1 209 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 H7C417 338 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ZNF701M0R085 212 aaPredicted RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 GABRPO00591 440 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 NME4O00746 187 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 MPDU1O75352 247 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ENTPD5O75356 428 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 TDP2O95551 362 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 OTCP00480 354 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 STAG3L2P0CL84 134 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 PGAM1P18669 254 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms