RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 MOSPD3O75425 235 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 ACTL6BO94805 426 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 RBP2P50120 134 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 TCTEX1D2Q8WW35 142 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 GPR173Q9NS66 373 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 M0R135 149 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 GUSBP08236 651 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 LGI3Q8N145 548 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF799Q96GE5 643 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 ARL5BQ96KC2 179 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 PTDSS2Q9BVG9 487 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 ATPIF1Q9UII2 106 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 OR2F2O95006 317 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 CASP6P55212 293 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 FOXF1Q12946 379 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 OR2F1Q13607 317 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 PCK2Q16822 640 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 OR4C16Q8NGL9 310 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 PLEKHA3Q9HB20 300 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 OR6C68A6NDL8 312 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 CT62P0C5K7 136 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 TMEM92Q6UXU6 159 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 MARC2Q969Z3 335 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 SEC16AO15027 2179 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 ZFPL1O95159 310 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 EIF2S3LQ2VIR3 472 aaKnown RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 PHLDA2Q53GA4 152 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 TMEM200AQ86VY9 491 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 GPR119Q8TDV5 335 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 CTSFQ9UBX1 484 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 FBXL4Q9UKA2 621 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 A0A1W2PPV9 198 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 OR4E1P0C645 316 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 OR10R2Q8NGX6 335 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 TAAR8Q969N4 342 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 MED30Q96HR3 178 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 NKX3-1Q99801 234 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 SDHAF2Q9NX18 166 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 PLEKHB1Q9UF11 243 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 TRIM64A6NGJ6 449 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 IGHV3-9P01782 118 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 CNR1P21554 472 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 ABCD3P28288 659 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 SSBP1Q04837 148 aaKnown RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF674Q2M3X9 581 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 LINC00303Q3SY05 128 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 OR51A2Q8NGJ7 313 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
PTPRU-205ENST00000460170 EXOSC3Q9NQT5 275 aaKnown RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF223Q9UK11 482 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-205ENST00000460170 ANKUB1A6NFN9 424 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 ABOP16442 354 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 M6PRP20645 277 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF117Q03924 483 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 COMTD1Q86VU5 262 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 BPHLQ86WA6 291 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 CPNE4Q96A23 557 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 YBX2Q9Y2T7 364 aaKnown RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 IGHV5-51A0A0C4DH38 117 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 OR5H14A6NHG9 310 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 CEBPZOSA8MTT3 80 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 KLRC4-KLRK1H3BQV0 150 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 MT-CO2P00403 227 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 IDH3GP51553 393 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 RRADP55042 308 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 CATR1Q13166 79 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 TOMM34Q15785 309 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 RNLSQ5VYX0 342 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 C17orf47Q8NEP4 570 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 FAM213BQ8TBF2 198 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 GDF2Q9UK05 429 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 EXO1Q9UQ84 846 aaKnown RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 ZFC3H1O60293 1989 aaKnown RBP13.34□□□□□ -0.27
PTPRU-205ENST00000460170 PIAS2O75928 621 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 TBPP20226 339 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF141Q15928 474 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 OR1J2Q8NGS2 313 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 HDGFL3Q9Y3E1 203 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF136P52737 540 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 ACOT7LQ6ZUV0 252 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 OR6K3Q8NGY3 331 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 APH1AQ96BI3 265 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 PCED1AQ9H1Q7 454 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 FAM60AQ9NP50 221 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 TIMM10BQ9Y5J6 103 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 KNTC1P50748 2209 aa13.34□□□□□ -0.27
PTPRU-205ENST00000460170 D6RAR5 112 aa13.33□□□□□ -0.27
PTPRU-205ENST00000460170 TOR1AO14656 332 aa13.33□□□□□ -0.27
PTPRU-205ENST00000460170 IFNA4P05014 189 aa13.33□□□□□ -0.27
PTPRU-205ENST00000460170 MYF5P13349 255 aa13.33□□□□□ -0.27
PTPRU-205ENST00000460170 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.27
PTPRU-205ENST00000460170 SEH1LQ96EE3 360 aa13.33□□□□□ -0.27
PTPRU-205ENST00000460170 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.27
PTPRU-205ENST00000460170 HYAL3O43820 417 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms