RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 DCLRE1CQ96SD1 692 aaKnown RBP17.73■□□□□ 0.43
VARS-218ENST00000459667 NMNAT2Q9BZQ4 307 aa17.73■□□□□ 0.43
VARS-218ENST00000459667 PAPOLBQ9NRJ5 636 aaKnown RBP17.73■□□□□ 0.43
VARS-218ENST00000459667 CYB5R1Q9UHQ9 305 aa17.73■□□□□ 0.43
VARS-218ENST00000459667 CSPG4Q6UVK1 2322 aa17.73■□□□□ 0.43
VARS-218ENST00000459667 ZANQ9Y493 2812 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 HPXP02790 462 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 GYPBP06028 91 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 SPI1P17947 270 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 USF1P22415 310 aaPredicted RBP17.72■□□□□ 0.43
VARS-218ENST00000459667 GGTLC2Q14390 218 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 TMEM255AQ5JRV8 349 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 LYPD4Q6UWN0 246 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 AMIGO2Q86SJ2 522 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 BPESC1Q9GZL8 116 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 C2CD3Q4AC94 2353 aa17.72■□□□□ 0.43
VARS-218ENST00000459667 LYNX1G3V0Z9 82 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 NCR1O76036 304 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 HMGN1P05114 100 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 LYNX1P0DP58 116 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 CLUP10909 449 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 PAICSP22234 425 aaKnown RBP17.71■□□□□ 0.43
VARS-218ENST00000459667 TUBG1P23258 451 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 FMO3P31513 532 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 MAGEB1P43366 347 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 RGS6P49758 472 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 GINS1Q14691 196 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 FAHD1Q6P587 224 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 ZNF540Q8NDQ6 660 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 GTF3AQ92664 365 aaKnown RBP17.71■□□□□ 0.43
VARS-218ENST00000459667 COG8Q96MW5 612 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 PITX2Q99697 317 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 ATF6BQ99941 703 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 POFUT1Q9H488 388 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 TUBG2Q9NRH3 451 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 ENOPH1Q9UHY7 261 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 STARD10Q9Y365 291 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 COMMD3-BMI1R4GMX3 469 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 TLN2Q9Y4G6 2542 aa17.71■□□□□ 0.43
VARS-218ENST00000459667 SETD2Q9BYW2 2564 aaPredicted RBP17.7■□□□□ 0.42
VARS-218ENST00000459667 PLSCR5A0PG75 271 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 FAM183AA6NL82 134 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 J3QW42 95 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 GIFP27352 417 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 RPS27P42677 84 aaKnown RBP17.7■□□□□ 0.42
VARS-218ENST00000459667 ZNF81P51508 661 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 TMEM249Q2WGJ8 235 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 PCGF3Q3KNV8 242 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 ACSM5Q6NUN0 579 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 PARP8Q8N3A8 854 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 OR6K6Q8NGW6 343 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 RDH5Q92781 318 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 OTULINQ96BN8 352 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 MED20Q9H944 212 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 WDR76Q9H967 626 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 PNRC2Q9NPJ4 139 aaKnown RBP17.7■□□□□ 0.42
VARS-218ENST00000459667 KRT84Q9NSB2 600 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 NKIRAS2Q9NYR9 191 aa17.7■□□□□ 0.42
VARS-218ENST00000459667 TIMM8AO60220 97 aaPredicted RBP17.69■□□□□ 0.42
VARS-218ENST00000459667 ENTPD1P49961 510 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 DAPP51397 102 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 MMP15P51511 669 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 BLVRAP53004 296 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 CCL8P80075 99 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 ECH1Q13011 328 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 ZNF511Q8NB15 262 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 PLEKHA8Q96JA3 519 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 MAP6Q96JE9 813 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 HCAR1Q9BXC0 346 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 PRRG3Q9BZD7 231 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 GABARAPL1Q9H0R8 117 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 SEMA6AQ9H2E6 1030 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 CYSLTR2Q9NS75 346 aa17.69■□□□□ 0.42
VARS-218ENST00000459667 CGGBP1Q9UFW8 167 aaPredicted RBP17.69■□□□□ 0.42
VARS-218ENST00000459667 ABCA1O95477 2261 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 IGHV4-61A0A0C4DH41 118 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 F5H5K5 113 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 CD5LO43866 347 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 SPARCP09486 303 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 PSKH1P11801 424 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 ACHEP22303 614 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 COL8A2P25067 703 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 LIPAP38571 399 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 CRISP1P54107 249 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 ESRRGP62508 458 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 CDK5Q00535 292 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 GABPB1Q06547 395 aaPredicted RBP17.68■□□□□ 0.42
VARS-218ENST00000459667 PSG7Q13046 419 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 RIN1Q13671 783 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 KRTAP27-1Q3LI81 207 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 LINC01590Q5TEZ4 76 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 OR5L1Q8NGL2 311 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 APOBEC3DQ96AK3 386 aaPredicted RBP17.68■□□□□ 0.42
VARS-218ENST00000459667 OSBPL10Q9BXB5 764 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 CHODLQ9H9P2 273 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 SLC25A19Q9HC21 320 aa17.68■□□□□ 0.42
VARS-218ENST00000459667 NSD1Q96L73 2696 aaPredicted RBP17.68■□□□□ 0.42
VARS-218ENST00000459667 HIVEP2P31629 2446 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 ZSCAN5BA6NJL1 495 aa17.67■□□□□ 0.42
VARS-218ENST00000459667 PRR23D1E9PI22 279 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms