RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 YES1P07947 543 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 KLK2P20151 261 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 HSD11B1P28845 292 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 SELENOPP49908 381 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 PCBD1P61457 104 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 PMP22Q01453 160 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 ROR2Q01974 943 aaKnown RBP7.89□□□□□ -1.15
VPS50-207ENST00000458530 DOC2BQ14184 412 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 SGCAQ16586 387 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 MOGQ16653 247 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 LRFN4Q6PJG9 635 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 FAM180AQ6UWF9 173 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 ZIC4Q8N9L1 334 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 Q8NA96 180 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 GJC3Q8NFK1 279 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 OR2G2Q8NGZ5 317 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 ABHD4Q8TB40 342 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 ST7LQ8TDW4 575 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 ABHD3Q8WU67 409 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 RNF133Q8WVZ7 376 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 GHSRQ92847 366 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 APH1AQ96BI3 265 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 SLAMF6Q96DU3 332 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 PGLYRP3Q96LB9 341 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 DACH2Q96NX9 599 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 FOXN4Q96NZ1 517 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 RBM24Q9BX46 236 aaKnown RBP7.89□□□□□ -1.15
VPS50-207ENST00000458530 HDHD5Q9BXW7 423 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 SLITRK2Q9H156 845 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 GDF2Q9UK05 429 aaPredicted RBP7.89□□□□□ -1.15
VPS50-207ENST00000458530 GRIP1Q9Y3R0 1128 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 LRP12Q9Y561 859 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 CSAG2Q9Y5P2 127 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 LIPGQ9Y5X9 500 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 R4GMQ9 66 aa7.89□□□□□ -1.15
VPS50-207ENST00000458530 NCOA6Q14686 2063 aaPredicted RBP7.89□□□□□ -1.15
VPS50-207ENST00000458530 MED12LQ86YW9 2145 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 A0A075B6Q4 140 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 IGKV1D-43A0A0B4J1Z2 117 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 TRAV1-2A0A0B4J238 106 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 IQCMA0A1B0GVH7 501 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 CD8B2A6NJW9 211 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ACOD1A6NK06 481 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 PSMD9O00233 223 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 MPZL1O95297 269 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 RAF1P04049 648 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 CD2P06729 351 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 CST2P09228 141 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 UBCP0CG48 685 aaKnown RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 CD8BP10966 210 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 PRF1P14222 555 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 PAX7P23759 505 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 PTGER4P35408 488 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 PSMB10P40306 273 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 RANBP1P43487 201 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SCRN3Q0VDG4 424 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 DBPQ10586 325 aaPredicted RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 ECH1Q13011 328 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 MRPL49Q13405 166 aaKnown RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 ZNF846Q147U1 533 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 EIF2S3LQ2VIR3 472 aaKnown RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 Q499Y3 187 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ACSM3Q53FZ2 586 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 BCL2L15Q5TBC7 163 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 OR2A2Q6IF42 318 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 OR7E24Q6IFN5 339 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 MZT2AQ6P582 158 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 LRRN1Q6UXK5 716 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 RPTNQ6XPR3 784 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ZNF704Q6ZNC4 412 aaPredicted RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 CEACAM19Q7Z692 300 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 DPPA2Q7Z7J5 298 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SYT9Q86SS6 491 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 LINC00346Q8IVM7 164 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ZNF100Q8IYN0 542 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 FNDC9Q8TBE3 224 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 TBC1D15Q8TC07 691 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 GPR148Q8TDV2 347 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ACOT12Q8WYK0 555 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SLC25A46Q96AG3 418 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 GMPPAQ96IJ6 420 aaPredicted RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 CEP19Q96LK0 163 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 C4orf45Q96LM5 186 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SLIRPQ9GZT3 109 aaKnown RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 C6orf62Q9GZU0 229 aaPredicted RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 NXF2Q9GZY0 626 aaKnown RBP7.88□□□□□ -1.15
VPS50-207ENST00000458530 SP140LQ9H930 580 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SNTG1Q9NSN8 517 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 CENPMQ9NSP4 180 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SLCO1C1Q9NYB5 712 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 SPRR3Q9UBC9 169 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ASH2LQ9UBL3 628 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 UPB1Q9UBR1 384 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 ADAM30Q9UKF2 790 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 GTF2A1LQ9UNN4 478 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 EMC9Q9Y3B6 208 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 UGT2A1Q9Y4X1 527 aa7.88□□□□□ -1.15
VPS50-207ENST00000458530 LHFPL6Q9Y693 200 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms