RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 IER3IP1Q9Y5U9 82 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 TRGV5A0A0B4J1U4 118 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 A0A1W2PRG6 482 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 WDR1O75083 606 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 GATBO75879 557 aaKnown RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 ZFPL1O95159 310 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 F10P00742 488 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 P04436 131 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 F13BP05160 661 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PTNP21246 168 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 EEF1B2P24534 225 aaKnown RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 ITGA3P26006 1051 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SLC6A6P31641 620 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PSMD7P51665 324 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ERVK-25P63136 954 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 RNPS1Q15287 305 aaKnown RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 FAM27D1Q5T7N8 215 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 C11orf71Q6IPW1 123 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 RPL22L1Q6P5R6 122 aaKnown RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 VWA1Q6PCB0 445 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 RPTNQ6XPR3 784 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 TUSC5Q8IXB3 177 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PM20D2Q8IYS1 436 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PAQR4Q8N4S7 273 aaPredicted RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 IL22RA1Q8N6P7 574 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 OR6K3Q8NGY3 331 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ACOT12Q8WYK0 555 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 UFD1Q92890 307 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 C1orf198Q9H425 327 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 NANSQ9NR45 359 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ACOXLQ9NUZ1 547 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 GLTPQ9NZD2 209 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 KLRF1Q9NZS2 232 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PRSS50Q9UI38 385 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ADAM30Q9UKF2 790 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PRR14LQ5THK1 2151 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 INTS1Q8N201 2190 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 IGHV3-15A0A0B4J1V0 119 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 NPIPA2E9PIF3 369 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 BOLA2-SMG1P6H3BVE0 249 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 NCR1O76036 304 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 YES1P07947 543 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 RFC3P40938 356 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ALDH3B1P43353 468 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 LSM3P62310 102 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 KLRB1Q12918 225 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 MED22Q15528 200 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 OR8B8Q15620 311 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 FAM76BQ5HYJ3 339 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 CLEC12AQ5QGZ9 265 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 TSPO2Q5TGU0 170 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SFXN4Q6P4A7 337 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 Q6ZT83 130 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SLC35D2Q76EJ3 337 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 FCRLAQ7L513 359 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 KRTAP1-3Q8IUG1 177 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SLC35F2Q8IXU6 374 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 TMEM156Q8N614 296 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 OR13C5Q8NGS8 318 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 OR5H6Q8NGV6 325 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SNX33Q8WV41 574 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 C4orf36Q96KX1 117 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SLC38A2Q96QD8 506 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 OR8B4Q96RC9 309 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 NUDT16L1Q9BRJ7 211 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 C11orf54Q9H0W9 315 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 ARMC7Q9H6L4 198 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SEC61A2Q9H9S3 476 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SLC7A10Q9NS82 523 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ASF1BQ9NVP2 202 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 KCNG2Q9UJ96 466 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 MED12Q93074 2177 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 A0A096LNT2 108 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 A8MXE2 369 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 HOXD4P09016 255 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 PTGER4P35408 488 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 NR4A2P43354 598 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ZNF41P51814 821 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 PPP3R1P63098 170 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 KRR1Q13601 381 aaKnown RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 OR7A5Q15622 319 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 YIF1BQ5BJH7 314 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 HACD4Q5VWC8 232 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 DEGS2Q6QHC5 323 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SKA3Q8IX90 412 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 TCTE3Q8IZS6 198 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 CYYR1Q96J86 154 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 KCTD7Q96MP8 289 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ZFP3Q96NJ6 502 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 IMPAD1Q9NX62 359 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 KLHL28Q9NXS3 571 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 GRIP1Q9Y3R0 1128 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ACOD1A6NK06 481 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ELOA3DA6NLF2 546 aaPredicted RBP4.29□□□□□ -1.72
RIF1-207ENST00000454583 CEACAM18A8MTB9 384 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 ZNF587BE7ETH6 402 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 SLC43A1O75387 559 aa4.29□□□□□ -1.72
RIF1-207ENST00000454583 CDRT1O95170 752 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms