RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PACSIN2Q9UNF0 486 aaPredicted RBP3.48□□□□□ -1.85
LINC00393-202ENST00000452852 CELSR2Q9HCU4 2923 aa3.48□□□□□ -1.85
LINC00393-202ENST00000452852 CSMD2Q7Z408 3487 aa3.48□□□□□ -1.85
LINC00393-202ENST00000452852 HEATR5BQ9P2D3 2071 aa3.48□□□□□ -1.85
LINC00393-202ENST00000452852 SCN2AQ99250 2005 aa3.48□□□□□ -1.85
LINC00393-202ENST00000452852 HECTD1Q9ULT8 2610 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 FLNCQ14315 2725 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CACNA1DQ01668 2161 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CSMD1Q96PZ7 3565 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SPTA1P02549 2419 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 TRAV17A0A0B4J275 112 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 TRBV7-9A0A0J9YWB2 115 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 MEX3AA1L020 520 aaKnown RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 VSTM2BA6NLU5 285 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NPIPA7E9PJI5 369 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 H0YC42 278 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 H3BMQ9 156 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CASQ2O14958 399 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 HCRTR1O43613 425 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ALOX12BO75342 701 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 C1orf105O95561 183 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 TSPAN12O95859 305 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 FGF4P08620 206 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 RNF224P0DH78 156 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NPIPA8P0DM63 369 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ICAM2P13598 275 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 RPS3P23396 243 aaKnown RBP eCLIP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 PSMB5P28074 263 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 HSD17B2P37059 387 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 GABRA4P48169 554 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 HLCSP50747 726 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ATP4BP51164 291 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 EMP2P54851 167 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 TMEM50BP56557 158 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 RPL8P62917 257 aaKnown RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SRPXP78539 464 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CRADDP78560 199 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ACVR1Q04771 509 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ST3GAL3Q11203 375 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CUL1Q13616 776 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SIX1Q15475 284 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NDUFA9Q16795 377 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SNAI3Q3KNW1 292 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ZFP69Q49AA0 526 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 C14orf177Q52M58 125 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SFT2D3Q587I9 215 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CTSL3PQ5NE16 218 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 REP15Q6BDI9 236 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 OR8G2PQ6IF36 304 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 IGFL2Q6UWQ7 119 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 COX15Q7KZN9 410 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NDUFAF7Q7L592 441 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SLC13A5Q86YT5 568 aaPredicted RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 PHC2Q8IXK0 858 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 PRSS58Q8IYP2 241 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 FGFRL1Q8N441 504 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 RNF10Q8N5U6 811 aaKnown RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CSNK1A1LQ8N752 337 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 LINC01555Q8NAE3 123 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 OR2L3Q8NG85 312 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 OR11G2Q8NGC1 345 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 OR9A1PQ8NGU1 263 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 FAM110BQ8TC76 370 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 LKAAEAR1Q8TD35 194 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 MCOLN3Q8TDD5 553 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 C1orf54Q8WWF1 131 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CITED1Q99966 193 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 DPH7Q9BTV6 452 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 DRC3Q9H069 523 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CRLF2Q9HC73 371 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 MRPS30Q9NP92 439 aaKnown RBP3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CHRAC1Q9NRG0 131 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 C14orf105Q9NVL8 296 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NDE1Q9NXR1 346 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CTSFQ9UBX1 484 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 MLXQ9UH92 298 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ZNF639Q9UID6 485 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NPIPA1Q9UND3 350 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 NTNG1Q9Y2I2 539 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 OARD1Q9Y530 152 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CSAG2Q9Y5P2 127 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 AUP1Q9Y679 476 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 CROCCQ5TZA2 2017 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SCN3AQ9NY46 2000 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 ZGRF1Q86YA3 2104 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 PTPN13Q12923 2485 aa3.47□□□□□ -1.85
LINC00393-202ENST00000452852 SEC16AO15027 2179 aa3.46□□□□□ -1.85
LINC00393-202ENST00000452852 ICE1Q9Y2F5 2266 aa3.46□□□□□ -1.85
LINC00393-202ENST00000452852 A0A075B6Q4 140 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 IGHV4-30-2A0A087WSY4 118 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 A0A1W2PNV4 684 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 NCF1BA6NI72 391 aaPredicted RBP3.46□□□□□ -1.86
LINC00393-202ENST00000452852 NCF1CA8MVU1 366 aaPredicted RBP3.46□□□□□ -1.86
LINC00393-202ENST00000452852 IDSB3KWA1 339 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 H0YGG7 62 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 BOLA2-SMG1P6H3BVE0 249 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 NR5A2O00482 541 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 RNF13O43567 381 aa3.46□□□□□ -1.86
LINC00393-202ENST00000452852 DNAJB6O75190 326 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms