RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 RPUSD3Q6P087 351 aaKnown RBP12.53□□□□□ -0.4
USP39-207ENST00000450066 INO80CQ6PI98 192 aaPredicted RBP12.53□□□□□ -0.4
USP39-207ENST00000450066 ELMOD2Q8IZ81 293 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SLC22A24Q8N4F4 322 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 RBMXL3Q8N7X1 1067 aaKnown RBP12.53□□□□□ -0.4
USP39-207ENST00000450066 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 ORAI1Q96D31 301 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 PBOV1Q9GZY1 135 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
USP39-207ENST00000450066 DAPK2Q9UIK4 370 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 HHLA2Q9UM44 414 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 DHDHQ9UQ10 334 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SLC34A2O95436 690 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 B4GALT1P15291 398 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SLC25A35Q3KQZ1 300 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 CCDC92Q53HC0 331 aaPredicted RBP12.53□□□□□ -0.4
USP39-207ENST00000450066 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 ASB5Q8WWX0 329 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 KCNJ15Q99712 375 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SLC25A18Q9H1K4 315 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
USP39-207ENST00000450066 URB1O60287 2271 aaKnown RBP12.52□□□□□ -0.4
USP39-207ENST00000450066 LOC107986453A0A1B0GWG9 222 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 ANKRD61A6NGH8 418 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 ZNF587BE7ETH6 402 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 K7EM74 188 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 TMEM127O75204 238 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 WISP2O76076 250 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 IGHV3-9P01782 118 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 TTRP02766 147 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 CD2P06729 351 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.4
USP39-207ENST00000450066 PRKXP51817 358 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 ELFN2Q5R3F8 820 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 V9GYH0 126 aa12.52□□□□□ -0.4
USP39-207ENST00000450066 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.41
USP39-207ENST00000450066 H3BSH0 61 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 SLC19A2O60779 497 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 AGTR1P30556 359 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 CX3CR1P49238 355 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 LRRTM1Q86UE6 522 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 GMPPAQ96IJ6 420 aaPredicted RBP12.52□□□□□ -0.41
USP39-207ENST00000450066 GFI1Q99684 422 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 WACQ9BTA9 647 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 GLRX2Q9NS18 164 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 CLCF1Q9UBD9 225 aa12.52□□□□□ -0.41
USP39-207ENST00000450066 ATMQ13315 3056 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 TRAV8-7A0A075B6U6 113 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 OR14I1A6ND48 311 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 P2RY10O00398 339 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 HPGDSO60760 199 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 FARS2O95363 451 aaKnown RBP12.51□□□□□ -0.41
USP39-207ENST00000450066 SLC2A2P11168 524 aaPredicted RBP12.51□□□□□ -0.41
USP39-207ENST00000450066 ATF1P18846 271 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 OTX1P32242 354 aaPredicted RBP12.51□□□□□ -0.41
USP39-207ENST00000450066 PSMD7P51665 324 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ZNF121P58317 390 aaPredicted RBP12.51□□□□□ -0.41
USP39-207ENST00000450066 PCBD1P61457 104 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 GALK2Q01415 458 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 SCRN3Q0VDG4 424 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ECH1Q13011 328 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 RAB35Q15286 201 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ZNF813Q6ZN06 617 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ZNF627Q7L945 461 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 NUFIP2Q7Z417 695 aaKnown RBP12.51□□□□□ -0.41
USP39-207ENST00000450066 ZNF100Q8IYN0 542 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ZNF433Q8N7K0 673 aaPredicted RBP12.51□□□□□ -0.41
USP39-207ENST00000450066 ZNF283Q8N7M2 679 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 HDHD2Q9H0R4 259 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ABRACLQ9P1F3 81 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 ADAM30Q9UKF2 790 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 V9GY05 133 aa12.51□□□□□ -0.41
USP39-207ENST00000450066 IFITM5A6NNB3 132 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 AIPO00170 330 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 SGCEO43556 437 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 APOC1P02654 83 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 ADRA2CP18825 462 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 EVX1P49640 407 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 TBR1Q16650 682 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
USP39-207ENST00000450066 PLEKHN1Q494U1 663 aaPredicted RBP12.5□□□□□ -0.41
USP39-207ENST00000450066 SLC16A14Q7RTX9 510 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 P4HA3Q7Z4N8 544 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 OR13C3Q8NGS6 347 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 ABHD17AQ96GS6 310 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 CKLFQ9UBR5 152 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 TIMM10BQ9Y5J6 103 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 FABP12A6NFH5 140 aa12.5□□□□□ -0.41
USP39-207ENST00000450066 DOK2O60496 412 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms