RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 NEU3Q9UQ49 428 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 RBBP6Q7Z6E9 1792 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SPINT2O43291 252 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF17P17021 662 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 C21orf33P30042 268 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 LGALS7P47929 136 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 BCL2A1Q16548 175 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 IGF2-ASQ6U949 168 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC38A9Q8NBW4 561 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 GIMAP5Q96F15 307 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 VPS25Q9BRG1 176 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 NPFFR1Q9GZQ6 430 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 C12orf4Q9NQ89 552 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TUBG2Q9NRH3 451 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 NUFIP1Q9UHK0 495 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 LOC102724200A0A096LPH7 203 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 C13orf42A0A1B0GVH6 325 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 B9A039 149 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SCG5P05408 212 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAM27E3Q08E93 113 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 COX10Q12887 443 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CLINT1Q14677 625 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 C17orf82Q86X59 251 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 GABRG1Q8N1C3 465 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM151AQ8N4L1 468 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR51L1Q8NGJ5 315 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ELP5Q8TE02 316 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TCTEX1D2Q8WW35 142 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACOT12Q8WYK0 555 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 WDR34Q96EX3 536 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 MBOAT4Q96T53 435 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 NOX3Q9HBY0 568 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TVP23AA6NH52 213 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ALX3O95076 343 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC25A16P16260 332 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 GNRHRP30968 328 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 FUT7Q11130 342 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SPATS1Q496A3 300 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SOWAHCQ53LP3 525 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 COQ5Q5HYK3 327 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 MZT2AQ6P582 158 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR4C3Q8NH37 302 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 GATA6Q92908 595 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SAMD8Q96LT4 415 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SF3B5Q9BWJ5 86 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACKR4Q9NPB9 350 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 BEX4Q9NWD9 120 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 POLDIP2Q9Y2S7 368 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 A0A1W2PPV9 198 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 A0A1W2PRQ8 180 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CENPXA8MT69 81 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TSPAN4O14817 238 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OPN1MWP04001 364 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 MRPL3P09001 348 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TFPTP0C1Z6 253 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OPN1MW2P0DN77 364 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OPN1MW3P0DN78 364 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 RAB11BQ15907 218 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 BATFQ16520 125 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 MICAQ29983 383 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 GLT8D1Q68CQ7 371 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 FAM57BQ71RH2 274 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CYB561A3Q8NBI2 242 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM104Q8NE00 496 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ALG12Q9BV10 488 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 POLR2J2Q9GZM3 115 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 PRDM14Q9GZV8 571 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 FLVCR2Q9UPI3 526 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SH2B3Q9UQQ2 575 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 KLF2Q9Y5W3 355 aaPredicted RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CDH10Q9Y6N8 788 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 IGKV3-7A0A075B6H7 116 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ARL6IP5O75915 188 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 IFNA10P01566 189 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 BMP2P12643 396 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF627Q7L945 461 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 LINC01356Q8N9X3 169 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 LILRB4Q8NHJ6 448 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TTTY10Q9BZA0 68 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 CBLN4Q9NTU7 201 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SSR3Q9UNL2 185 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 EFCAB10A6NFE3 127 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 CBY3A6NI87 242 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ADAM11O75078 769 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ACP2P11117 423 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 UBE2KP61086 200 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF117Q03924 483 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 PRICKLE4Q2TBC4 344 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 THEM4Q5T1C6 240 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 RSBN1Q5VWQ0 802 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 DTX1Q86Y01 620 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZFP62Q8NB50 900 aaPredicted RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 NRTNQ99748 197 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 C20orf24Q9BUV8 137 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 SEPSECSQ9HD40 501 aaKnown RBP5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 RLIMQ9NVW2 624 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 LOC105371242A0A075B767 164 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TRGV10A0A0A0MS01 117 aa5.01□□□□□ -1.61
CDC42BPA-209ENST00000448940 TMEM269A0A1B0GVZ9 245 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms