RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TMEM106C	Q9BVX2	250 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	CFHR5	Q9BXR6	569 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	TPSD1	Q9BZJ3	242 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	BANF2	Q9H503	90 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	IL23A	Q9NPF7	189 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	MED29	Q9NX70	200 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	MTFP1	Q9UDX5	166 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	DHDH	Q9UQ10	334 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	COA3	Q9Y2R0	106 aa	Predicted RBP	11.29	□□□□□ -0.6
DDR1-238	ENST00000446312	PCDH15	Q96QU1	1955 aa		11.29	□□□□□ -0.6
DDR1-238	ENST00000446312		A0A1W2PP11	408 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	LOC390937	A0A1W2PQ73	354 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	OR6C76	A6NM76	312 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	GSTZ1	O43708	216 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	PRAF2	O60831	178 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	NKX2-2	O95096	273 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	FGF19	O95750	216 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	CTLA4	P16410	223 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	CXCR1	P25024	350 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	GPR143	P51810	404 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	EGR4	Q05215	589 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	VWA2	Q5GFL6	755 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	FAM69B	Q5VUD6	431 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	TMEM71	Q6P5X7	295 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ZSCAN1	Q8NBB4	408 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	FLVCR1-AS1	Q8TAF5	88 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	PNPLA2	Q96AD5	504 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SELENOI	Q9C0D9	397 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	CYP8B1	Q9UNU6	501 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	DIDO1	Q9BTC0	2240 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SVIL	O95425	2214 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SDCBP	O00560	298 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNHIT1	O43257	154 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ICOSLG	O75144	302 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	RPS4Y1	P22090	263 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	PPT1	P50897	306 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	DHRS2	Q13268	280 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	CEBPE	Q15744	281 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	GLT8D1	Q68CQ7	371 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SLC36A1	Q7Z2H8	476 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNF550	Q7Z398	422 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SLC22A18	Q96BI1	424 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SLC41A2	Q96JW4	573 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	FOXQ1	Q9C009	403 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	GAREM1	Q9H706	876 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SERTAD3	Q9UJW9	196 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ICAM5	Q9UMF0	924 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	WASF3	Q9UPY6	502 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	HEBP2	Q9Y5Z4	205 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNF736	B4DX44	427 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SCD	O00767	359 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ADH1B	P00325	375 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	REN	P00797	406 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNF14	P17017	642 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	S1PR1	P21453	382 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	GAL	P22466	123 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	PPP1R1A	Q13522	171 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ZNF74	Q16587	644 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	OR2W3	Q7Z3T1	314 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	LDLRAD3	Q86YD5	345 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	TGIF2LX	Q8IUE1	241 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	PUSL1	Q8N0Z8	303 aa	Known RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SVBP	Q8N300	66 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	FAM71C	Q8NEG0	241 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	OR13C3	Q8NGS6	347 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	TCTEX1D2	Q8WW35	142 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	CST11	Q9H112	138 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SEMA6C	Q9H3T2	930 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	SEC61A2	Q9H9S3	476 aa		11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ELL3	Q9HB65	397 aa	Predicted RBP	11.28	□□□□□ -0.6
DDR1-238	ENST00000446312	ESPL1	Q14674	2120 aa		11.27	□□□□□ -0.6
DDR1-238	ENST00000446312	XRCC3	O43542	346 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	ADAP1	O75689	374 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	BDKRB2	P30411	391 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	FBXW4	P57775	412 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	ACKR1	Q16570	336 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	SLC16A9	Q7RTY1	509 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	KDF1	Q8NAX2	398 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	ZBTB8A	Q96BR9	441 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	VSTM2L	Q96N03	204 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	PTGES2	Q9H7Z7	377 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	ACKR4	Q9NPB9	350 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	PCDHB10	Q9UN67	800 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	NPTN	Q9Y639	398 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	PTPRS	Q13332	1948 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	TCRBV21S2A2	A0A5A6	115 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	GPRIN2	O60269	458 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	PRAMEF2	O60811	474 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	FBXO24	O75426	580 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	FCAR	P24071	287 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	NTSR1	P30989	418 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	GNG10	P50151	68 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	NPY4R	P50391	375 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	S100A10	P60903	97 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	BLOC1S1	P78537	153 aa		11.27	□□□□□ -0.61
DDR1-238	ENST00000446312	NFATC4	Q14934	902 aa		11.27	□□□□□ -0.61

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