RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
ERCC3-203ENST00000445889 ACOT7LQ6ZUV0 252 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 OR52N4Q8NGI2 321 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 THAP6Q8TBB0 222 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 GPBAR1Q8TDU6 330 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF587Q96SQ5 575 aaPredicted RBP12.74□□□□□ -0.37
ERCC3-203ENST00000445889 IGHV5-51A0A0C4DH38 117 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 A0A1B0GTI1 187 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM269A0A1B0GVZ9 245 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 BGLAPP02818 100 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 CTHP32929 405 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 TNFRSF4P43489 277 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 FLI1Q01543 452 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-203ENST00000445889 ELOCQ15369 112 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 AKIRIN2Q53H80 203 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 ZFP82Q8N141 532 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 C8orf44Q96CB5 159 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 SOX7Q9BT81 388 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 SLC7A5P2Q9GIP4 190 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 MED29Q9NX70 200 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM218A2RU14 115 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 EPOPA6NHQ4 379 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 F8W036 122 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 ACTL6AO96019 429 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 THEGLP0DJG4 465 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 SLC2A1P11166 492 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 SCAND1P57086 179 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 RPL27P61353 136 aaKnown RBP12.73□□□□□ -0.37
ERCC3-203ENST00000445889 BLOC1S1P78537 153 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-203ENST00000445889 TMED6Q8WW62 240 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 DUSP15Q9H1R2 295 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-203ENST00000445889 OR2S2Q9NQN1 319 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 CYP8B1Q9UNU6 501 aa12.73□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 PLEKHN1Q494U1 663 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-203ENST00000445889 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 FOXRED2Q8IWF2 684 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ARMC10Q8N2F6 343 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 GTPBP8Q8N3Z3 284 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-203ENST00000445889 FAM131CQ96AQ9 280 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 NICN1Q9BSH3 213 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 PRODH2Q9UF12 536 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 IGHV3-20A0A0C4DH32 117 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 SULT2B1O00204 365 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 TNFRSF10CO14798 259 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 STK17BO94768 372 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 IL33O95760 270 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-203ENST00000445889 IL12BP29460 328 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 INPP5JQ15735 1006 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ADGRE4PQ86SQ3 457 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF440Q8IYI8 595 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 MARCH1Q8TCQ1 289 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 C12orf57Q99622 126 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 TLNRD1Q9H1K6 362 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 FN3KRPQ9HA64 309 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 FAM96BQ9Y3D0 163 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 NUP210LQ5VU65 1888 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 IGLV1-36A0A0B4J1U3 117 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 A0A1W2PP11 408 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 C9orf170A2RU37 121 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 METTL12A8MUP2 240 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF208O43345 1280 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ADAP1O75689 374 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 SEMA4FO95754 770 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 FZD2Q14332 565 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 CATSPERDQ86XM0 798 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 LIPHQ8WWY8 451 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ARL5BQ96KC2 179 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 ADAM19Q9H013 955 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 TREM1Q9NP99 234 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 GDF2Q9UK05 429 aaPredicted RBP12.72□□□□□ -0.37
ERCC3-203ENST00000445889 OR52A1Q9UKL2 312 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 CSAG2Q9Y5P2 127 aa12.72□□□□□ -0.37
ERCC3-203ENST00000445889 PCDH15Q96QU1 1955 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 RAB27BO00194 218 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 AGPAT2O15120 278 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 ANOS1P23352 680 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 ZBTB25P24278 435 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 UNC119Q13432 240 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 GFOD2Q3B7J2 385 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 EMC4Q5J8M3 183 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 C1orf189Q5VU69 101 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 LYG2Q86SG7 212 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
ERCC3-203ENST00000445889 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.37
ERCC3-203ENST00000445889 OR10R2Q8NGX6 335 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms