RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 HIST2H3PS2Q5TEC6 136 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 KCTD18Q6PI47 426 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-208ENST00000444533 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 CFAP77Q6ZQR2 320 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 HIST2H3AQ71DI3 136 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 TIGD4Q8IY51 512 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 SYNPRQ8TBG9 265 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 SNX33Q8WV41 574 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 ZNRF4Q8WWF5 429 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 ASB17Q8WXJ9 295 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 MBD6Q96DN6 1003 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 SLAMF6Q96DU3 332 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 MBOAT4Q96T53 435 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 MYCBPQ99417 103 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-208ENST00000444533 MNTQ99583 582 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 MARCH7Q9H992 704 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 DYNLRB1Q9NP97 96 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 TBCCD1Q9NVR7 557 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 DUSP13Q9UII6 198 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 DCHS2Q6V1P9 2916 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 CADP27708 2225 aa12.17□□□□□ -0.46
SSBP3-208ENST00000444533 ABCA12Q86UK0 2595 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 H3BSA7 217 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 SELENOFO60613 162 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 SOD3P08294 240 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 H2BFMP0C1H6 154 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 DANCRP0C864 163 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 HTR1FP30939 366 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 EVX1P49640 407 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 KLF3P57682 345 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 PPP1CBP62140 327 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 SNRPGP62308 76 aaKnown RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 MALLQ13021 153 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 EFNB3Q15768 340 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 PCK2Q16822 640 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 AADACL4Q5VUY2 407 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 RHOUQ7L0Q8 258 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 PAQR4Q8N4S7 273 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 OTOSQ8NHW6 89 aa12.16□□□□□ -0.46
SSBP3-208ENST00000444533 MRPL24Q96A35 216 aaKnown RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 TRAF4Q9BUZ4 470 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 BARX1Q9HBU1 254 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-208ENST00000444533 PLSCR5A0PG75 271 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF670-ZNF695F2Z2N8 137 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 M0R135 149 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 SLC16A6O15403 523 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 GPRIN2O60269 458 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 MRPL3P09001 348 aaKnown RBP12.15□□□□□ -0.46
SSBP3-208ENST00000444533 EFNB1P98172 346 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 IL5RAQ01344 420 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 GGTLC2Q14390 218 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 NKPD1Q17RQ9 610 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 DRAM2Q6UX65 266 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 KRT77Q7Z794 578 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF283Q8N7M2 679 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF799Q96GE5 643 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 MAP6Q96JE9 813 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 ZNF582Q96NG8 517 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-208ENST00000444533 KCNJ15Q99712 375 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 ABHD6Q9BV23 337 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 CACNG6Q9BXT2 260 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 MROQ9BYG7 248 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 NIPAL2Q9H841 368 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
SSBP3-208ENST00000444533 HAO2Q9NYQ3 351 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 DNAJC27Q9NZQ0 273 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 PCDHGB1Q9Y5G3 927 aa12.15□□□□□ -0.46
SSBP3-208ENST00000444533 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
SSBP3-208ENST00000444533 NOTCH2Q04721 2471 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 ROS1P08922 2347 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 CCDC182A6NF36 153 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 M0R233 179 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 ICMTO60725 284 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 LCATP04180 440 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 DBHP09172 617 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 WNT5AP41221 380 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 MTNR1AP48039 350 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 ART1P52961 327 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 ATP5J2P56134 94 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 IL18R1Q13478 541 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 RIPK1Q13546 671 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 OCLNQ16625 522 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 SPATC1Q76KD6 591 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 BCDIN3DQ7Z5W3 292 aaKnown RBP12.14□□□□□ -0.47
SSBP3-208ENST00000444533 SLC35F2Q8IXU6 374 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 LRRC75A-AS1Q8N1F1 130 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 OR51G2Q8NGK0 314 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 SLC7A6Q92536 515 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 PERPQ96FX8 193 aa12.14□□□□□ -0.47
SSBP3-208ENST00000444533 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-208ENST00000444533 SYT3Q9BQG1 590 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms