RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SLAMF6Q96DU3 332 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 RDH12Q96NR8 316 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 ATF6BQ99941 703 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 ABHD6Q9BV23 337 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 MRPL37Q9BZE1 423 aaKnown RBP13.78□□□□□ -0.2
USP39-205ENST00000442708 CBLN4Q9NTU7 201 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
USP39-205ENST00000442708 IMPAD1Q9NX62 359 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 MYEF2Q9P2K5 600 aaKnown RBP13.78□□□□□ -0.2
USP39-205ENST00000442708 GRIP1Q9Y3R0 1128 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 SPEF1Q9Y4P9 236 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 AKAP9Q99996 3911 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 USF3Q68DE3 2245 aa13.78□□□□□ -0.2
USP39-205ENST00000442708 PRR32B1ATL7 298 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 ENTPD6O75354 484 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 CLIC3O95833 236 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 CLPTM1O96005 669 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 ACSM4P0C7M7 580 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 CDKN1AP38936 164 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 SNRPGP62308 76 aaKnown RBP13.77□□□□□ -0.21
USP39-205ENST00000442708 ADARB1P78563 741 aaKnown RBP13.77□□□□□ -0.21
USP39-205ENST00000442708 DEFB113Q30KQ7 82 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 AGAP6Q5VW22 663 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 SLC16A9Q7RTY1 509 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 GID4Q8IVV7 300 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 RFLNBQ8N5W9 214 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 OR1J1Q8NGS3 322 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 OTOSQ8NHW6 89 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 ABHD4Q8TB40 342 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 TRUB1Q8WWH5 349 aaKnown RBP13.77□□□□□ -0.21
USP39-205ENST00000442708 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
USP39-205ENST00000442708 ADGRL4Q9HBW9 690 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 C8orf4Q9NR00 106 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 FAIMQ9NVQ4 179 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 H2AFY2Q9P0M6 372 aaPredicted RBP13.77□□□□□ -0.21
USP39-205ENST00000442708 COPS3Q9UNS2 423 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 STARD10Q9Y365 291 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 CMAHPQ9Y471 501 aa13.77□□□□□ -0.21
USP39-205ENST00000442708 C5orf63A6NC05 138 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 F5H5K5 113 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 TMCC2O75069 709 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 APOL3O95236 402 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 ABHD16AO95870 558 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 LCKP06239 509 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 ALOX5APP20292 161 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 HTR1FP30939 366 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 OTX1P32242 354 aaPredicted RBP13.76□□□□□ -0.21
USP39-205ENST00000442708 MPV17P39210 176 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 RAD52P43351 418 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 PPP1CBP62140 327 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 ECH1Q13011 328 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 EFNB3Q15768 340 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 OCLNQ16625 522 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 SLC25A30Q5SVS4 291 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 LCN1P1Q5VSP4 162 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 RGS7BPQ6MZT1 257 aaPredicted RBP13.76□□□□□ -0.21
USP39-205ENST00000442708 SHFQ7M4L6 423 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 RHOXF1Q8NHV9 184 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 RNF133Q8WVZ7 376 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 CYGBQ8WWM9 190 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 PIGTQ969N2 578 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 MARS2Q96GW9 593 aaKnown RBP13.76□□□□□ -0.21
USP39-205ENST00000442708 DOK1Q99704 481 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 SYT3Q9BQG1 590 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 OR2J1Q9GZK6 312 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 PLK3Q9H4B4 646 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 CENPMQ9NSP4 180 aa13.76□□□□□ -0.21
USP39-205ENST00000442708 EIF3KQ9UBQ5 218 aaKnown RBP13.76□□□□□ -0.21
USP39-205ENST00000442708 SLC22A31A6NKX4 558 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 NDUFS7O75251 213 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 ATP6V1G2O95670 118 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 ZNF250P15622 560 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 OPRL1P41146 370 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 RPS23P62266 143 aaKnown RBP13.75□□□□□ -0.21
USP39-205ENST00000442708 RIPK1Q13546 671 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 COLCA1Q6ZS62 124 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 THEM6Q8WUY1 208 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 APH1BQ8WW43 257 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 DCLRE1CQ96SD1 692 aaKnown RBP13.75□□□□□ -0.21
USP39-205ENST00000442708 CNN2Q99439 309 aaKnown RBP13.75□□□□□ -0.21
USP39-205ENST00000442708 CACNG6Q9BXT2 260 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 BCL2L14Q9BZR8 327 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 ELOVL3Q9HB03 270 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 ZNF701Q9NV72 531 aaPredicted RBP13.75□□□□□ -0.21
USP39-205ENST00000442708 TBCCD1Q9NVR7 557 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 BEX4Q9NWD9 120 aaPredicted RBP13.75□□□□□ -0.21
USP39-205ENST00000442708 HAO2Q9NYQ3 351 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 WARS2Q9UGM6 360 aaKnown RBP13.75□□□□□ -0.21
USP39-205ENST00000442708 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 EDARQ9UNE0 448 aa13.75□□□□□ -0.21
USP39-205ENST00000442708 ARID1AO14497 2285 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 PRRC2AP48634 2157 aaKnown RBP13.74□□□□□ -0.21
USP39-205ENST00000442708 IGLV3-9A0A075B6K5 115 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 B9A039 149 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 ZNF878C9JN71 531 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 LYNP07948 512 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 GNAO1P09471 354 aa13.74□□□□□ -0.21
USP39-205ENST00000442708 PAX1P15863 534 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms