RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 FTCDNL1E5RQL4 147 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 HOXD4P09016 255 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 ANOS1P23352 680 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 AVPR2P30518 371 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 CDAP32320 146 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 PRKXP51817 358 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 BIDP55957 195 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 TMEM81Q6P7N7 255 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 FJX1Q86VR8 437 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 COMMD2Q86X83 199 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SPERTQ8NA61 448 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC5A6Q9Y289 635 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 COL6A3P12111 3177 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 A0A1W2PQD3 144 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 PAPD4Q6PIY7 484 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 TRAPPC6BQ86SZ2 158 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 OR1S1Q8NH92 325 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 STT3BQ8TCJ2 826 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 A0A1B0GX78 115 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 OR5H14A6NHG9 310 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 OR6C65A6NJZ3 312 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 OR2T1O43869 369 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 VAMP1P23763 118 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 HSF1Q00613 529 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 FOXF1Q12946 379 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 MFAP5Q13361 173 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 NUP54Q7Z3B4 507 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 ST8SIA4Q92187 359 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF75AQ96N20 296 aa12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 GDF2Q9UK05 429 aaPredicted RBP12.09□□□□□ -0.47
HERPUD1-204ENST00000439977 ADAM10O14672 748 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 PMS2P2O95744 297 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 AKR1C4P17516 323 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 CD34P28906 385 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 ELP2Q6IA86 826 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 H1FNTQ75WM6 255 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 C17orf82Q86X59 251 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 OR2I1PQ8NGU4 316 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 ASB10Q8WXI3 467 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 C11orf40Q8WZ69 217 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 SELENOIQ9C0D9 397 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 COL4A2P08572 1712 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 RAB27BO00194 218 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 TO15178 435 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF217O75362 1048 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 DCNP07585 359 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 PTGS2P35354 604 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 CAPZA1P52907 286 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 UNC119Q13432 240 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 COX15Q7KZN9 410 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 PLXDC1Q8IUK5 500 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 CCDC107Q8WV48 283 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 NICN1Q9BSH3 213 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 CST11Q9H112 138 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 UCK1Q9HA47 277 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 UPB1Q9UBR1 384 aa12.08□□□□□ -0.48
HERPUD1-204ENST00000439977 A0A1W2PNR3 127 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 HSPB2A8KAH6 182 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 H3BUI4 141 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 SYT7O43581 403 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 EFNA2O43921 213 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 TIAF1O95411 115 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 APOC3P02656 99 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ABOP16442 354 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 HRH1P35367 487 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 LUMP51884 338 aaPredicted RBP12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 HSPB2Q16082 182 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 RNASE10Q5GAN6 216 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 TMPRSS9Q7Z410 1059 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 CDH26Q8IXH8 852 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 SLC25A45Q8N413 288 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 APCDD1LQ8NCL9 501 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 OR51E1Q8TCB6 317 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 ZBTB8AQ96BR9 441 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 SLAMF6Q96DU3 332 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 KLRF1Q9NZS2 232 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 POLR1DQ9Y2S0 133 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 SESN1Q9Y6P5 492 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 RFPL4AA6NLU0 287 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 EEF1E1-BLOC1S5C9J1V9 151 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 RFPL4AL1F8VTS6 287 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PIAS2O75928 621 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 PMP2P02689 132 aa12.07□□□□□ -0.48
HERPUD1-204ENST00000439977 TTRP02766 147 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms