RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HIST3H2AQ7L7L0 130 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 MAMDC2Q7Z304 686 aaPredicted RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 TIGD4Q8IY51 512 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 YIPF7Q8N8F6 280 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ZFP41Q8N8Y5 198 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ADPRHL1Q8NDY3 354 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OR4K17Q8NGC6 315 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OR1J4Q8NGS1 313 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OR5J2Q8NH18 312 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 OR51A7Q8NH64 312 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 PHOSPHO1Q8TCT1 267 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SSC4DQ8WTU2 575 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 RNF138Q8WVD3 245 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 HIST1H2ACQ93077 130 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ADIPOR1Q96A54 375 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 HAVCR1Q96D42 359 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 S100A16Q96FQ6 103 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 TRIB1Q96RU8 372 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 NUDT16L1Q9BRJ7 211 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM246Q9BRR3 403 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ALG12Q9BV10 488 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 TMPRSS13Q9BYE2 586 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 ENKD1Q9H0I2 346 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 MED28Q9H204 178 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 SLCO5A1Q9H2Y9 848 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 MYOZ1Q9NP98 299 aaPredicted RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 NLKQ9UBE8 527 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 NUFIP1Q9UHK0 495 aaKnown RBP4.24□□□□□ -1.73
EDEM3-203ENST00000439962 DKKL1Q9UK85 242 aa4.24□□□□□ -1.73
EDEM3-203ENST00000439962 KIAA1549Q9HCM3 1950 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 MEIKINA0A087WXM9 373 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 MEGF11A6BM72 1044 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 GPR171O14626 319 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 TP53I11O14683 189 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 TSPAN2O60636 221 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SCGNO76038 276 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 RGS11O94810 467 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 APOL3O95236 402 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 UTS2O95399 124 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 BGLAPP02818 100 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SULT1A3P0DMM9 295 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SULT1A4P0DMN0 295 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 DPP4P27487 766 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 RPL4P36578 427 aaKnown RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 POLR2HP52434 150 aaKnown RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SLC3A1Q07837 685 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 CBFBQ13951 182 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 POU4F3Q15319 338 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 ZMYND11Q15326 602 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 H3F3CQ6NXT2 135 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 DNM1P34Q6PK57 102 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 IGFL2Q6UWQ7 119 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 APOOLQ6UXV4 268 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 RHOUQ7L0Q8 258 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 DOLPP1Q86YN1 238 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF441Q8N8Z8 693 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 CNEP1R1Q8N9A8 125 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 GALNT11Q8NCW6 608 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 OR8K3Q8NH51 312 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM234Q8WY98 164 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 ST8SIA1Q92185 356 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 MED20Q9H944 212 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 GPN1Q9HCN4 374 aaPredicted RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 RANGRFQ9HD47 186 aaPredicted RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 TAS2R10Q9NYW0 307 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 PPP4R1LQ9P1A2 415 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 GRHPRQ9UBQ7 328 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SCP2D1Q9UJQ7 156 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SLC5A6Q9Y289 635 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 AUP1Q9Y679 476 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 TRGV5A0A0B4J1U4 118 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 ANKRD20A5PA0PJZ0 165 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 OR6C70A6NIJ9 312 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 E9PI62 339 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 NPIPB7O75200 414 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF780AO75290 641 aaPredicted RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 UPK3AO75631 287 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 KRT33AO76009 404 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 CLDN1O95832 211 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 HRGP04196 525 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 H2AFB2P0C5Z0 115 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 ATF1P18846 271 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 MSX1P28360 303 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 RBPJQ06330 500 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 MPPED2Q15777 294 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 KCTD18Q6PI47 426 aaPredicted RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 CBLN3Q6UW01 205 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 GRINAQ7Z429 371 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 CADM2Q8N3J6 435 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SDR9C7Q8NEX9 313 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 OR4K13Q8NH42 304 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 OR5AK2Q8NH90 309 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 UBASH3BQ8TF42 649 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 FCAMRQ8WWV6 532 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 NRGNQ92686 78 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 INTS12Q96CB8 462 aaKnown RBP4.23□□□□□ -1.73
EDEM3-203ENST00000439962 MAP6Q96JE9 813 aa4.23□□□□□ -1.73
EDEM3-203ENST00000439962 SFXN2Q96NB2 322 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms