RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RSPO1Q2MKA7 263 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 LEG1Q6P5S2 330 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 FBXW12Q6X9E4 464 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 PEG10Q86TG7 708 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 ZNF283Q8N7M2 679 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 SLC26A10Q8NG04 563 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 OR4M2Q8NGB6 313 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 COQ7Q99807 217 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 HDHD2Q9H0R4 259 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 SRA1Q9HD15 236 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 TMEM106BQ9NUM4 274 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 IL19Q9UHD0 177 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 POLR1DQ9Y2S0 133 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 NPTNQ9Y639 398 aa17.15■□□□□ 0.34
NCKIPSD-206ENST00000439518 LOC105371242A0A075B767 164 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 ISPDA4D126 451 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 J3QLI3 93 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 IDH3BO43837 385 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 VENTXO95231 258 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 TNFRSF1AP19438 455 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 RRM2P31350 389 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 RBMXP38159 391 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 IFNGR2P38484 337 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 CENPAP49450 140 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 GNGT1P63211 74 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 SCGB2A2Q13296 93 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 CORO6Q6QEF8 472 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZBTB46Q86UZ6 589 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 JAZF1Q86VZ6 243 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 DEFB107AQ8IZN7 70 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 TEX29Q8N6K0 151 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR4K13Q8NH42 304 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 IFT27Q9BW83 186 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 TMCC3Q9ULS5 477 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 DYSFO75923 2080 aa17.14■□□□□ 0.33
NCKIPSD-206ENST00000439518 ARHGAP32A7KAX9 2087 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 RENP00797 406 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 GATA3P23771 443 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 HMGA2P52926 109 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 TSPAN31Q12999 210 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 HLXQ14774 488 aaPredicted RBP17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 KRTAP27-1Q3LI81 207 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 DCAF12L2Q5VW00 463 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 PGBD2Q6P3X8 592 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 C16orf89Q6UX73 402 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZNF620Q6ZNG0 422 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 COLCA1Q6ZS62 124 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZNF771Q7L3S4 317 aaPredicted RBP17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 C1QL2Q7Z5L3 287 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZDHHC21Q8IVQ6 265 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 SEMA6DQ8NFY4 1073 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR5L1Q8NGL2 311 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 GNPDA2Q8TDQ7 276 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 ITLN1Q8WWA0 313 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 APOBEC3DQ96AK3 386 aaPredicted RBP17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 NDE1Q9NXR1 346 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 UBAP1Q9NZ09 502 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 ANK2Q01484 3957 aa17.13■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR6C68A6NDL8 312 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 SURF4O15260 269 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 DCTN3O75935 186 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 SBK2P0C263 348 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 SLC18B1Q6NT16 456 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 LRRC28Q86X40 367 aaPredicted RBP17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR5AS1Q8N127 324 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR2V2Q96R30 315 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 SIGLEC11Q96RL6 698 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 RPRD1BQ9NQG5 326 aaKnown RBP17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 PTTG3PQ9NZH4 202 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 OPN4Q9UHM6 478 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 PPP1R3CQ9UQK1 317 aa17.12■□□□□ 0.33
NCKIPSD-206ENST00000439518 PPIAL4EA0A075B759 164 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 PPIAL4CA0A0B4J2A2 164 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 PPIAL4DF5H284 164 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 KRT36O76013 467 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 PPIAL4FP0DN26 164 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 EPHA1P21709 976 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 NOS3P29474 1203 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 LCN2P80188 198 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 SLC36A3Q495N2 470 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 TMEM155Q4W5P6 130 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR2T2Q6IF00 324 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 CFAP77Q6ZQR2 320 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 OR8G5Q8NG78 346 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZFAND2BQ8WV99 257 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 C1QTNF5Q9BXJ0 243 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 ACTR3BQ9P1U1 418 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 CYB5R1Q9UHQ9 305 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 LYVE1Q9Y5Y7 322 aa17.11■□□□□ 0.33
NCKIPSD-206ENST00000439518 ACSM4P0C7M7 580 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 GGT2P36268 569 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 MNAT1P51948 309 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 BTG1P62324 171 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 ECH1Q13011 328 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZMYND11Q15326 602 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 SLC35F1Q5T1Q4 408 aa17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 ZNF770Q6IQ21 691 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-206ENST00000439518 SLC27A4Q6P1M0 643 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms