RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 CCNA1P78396 465 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 PRR3P79522 188 aaKnown RBP1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CDK5Q00535 292 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 RNASE13Q5GAN3 156 aaKnown RBP1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 UBE2UQ5VVX9 321 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TMEM256Q8N2U0 113 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 NPWQ8N729 165 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 COX18Q8N8Q8 333 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TMEM105Q8N8V8 129 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SHC3Q92529 594 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 KIFAP3Q92845 792 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 PKIBQ9C010 78 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 EDA2RQ9HAV5 297 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 EXOSC4Q9NPD3 245 aaKnown RBP1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 C8orf17Q9NRJ1 99 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CBY1Q9Y3M2 126 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SEC16AO15027 2179 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 IGKV3D-11A0A0A0MRZ8 115 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 H0Y8G0 127 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 FKBP6O75344 327 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 RDH16O75452 317 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SLC22A5O76082 557 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SEMA3DO95025 777 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 EIF4EP06730 217 aaKnown RBP1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ANXA5P08758 320 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 PABPC4LP0CB38 370 aaKnown RBP1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ZNF24P17028 368 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ATF6P18850 670 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CD34P28906 385 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SULT1E1P49888 294 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ATP5IP56385 69 aaPredicted RBP1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TAS2R31P59538 309 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 STXBP1P61764 594 aaKnown RBP1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 GPR107Q5VW38 600 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 NANOGNBQ7Z5D8 188 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SPANXA2-OT1Q8N9U9 137 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CHST4Q8NCG5 386 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 OR56B2PQ8NGI1 322 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SLC2A14Q8TDB8 520 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 LRRC29Q8WV35 223 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TMEM230Q96A57 120 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 DCPSQ96C86 337 aaKnown RBP1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 RBBP8Q99708 897 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 RSG1Q9BU20 258 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 HRASLS2Q9NWW9 162 aa1.64□□□□□ -2.15
UPP2-IT1-201ENST00000439185 IGHV3OR16-8A0A075B7F1 116 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 IGHV7-4-1A0A0J9YVY3 117 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SMKR1H3BMG3 65 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CLOCKO15516 846 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CDC40O60508 579 aaKnown RBP eCLIP1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 PALMO75781 387 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 GFERP55789 205 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CEP55Q53EZ4 464 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 PPM1LQ5SGD2 360 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 FAM222AQ5U5X8 452 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ADNP2Q6IQ32 1131 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SLC8B1Q6J4K2 584 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 H3F3CQ6NXT2 135 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 MBOAT1Q6ZNC8 495 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 IQCKQ8N0W5 287 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 C11orf72Q8NBR9 251 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 APCDD1LQ8NCL9 501 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TTLQ8NG68 377 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 OR7G2Q8NG99 324 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 FRMD8P1Q9BZ68 369 aaPredicted RBP1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TMCC3Q9ULS5 477 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SCN4AP35499 1836 aa1.63□□□□□ -2.15
UPP2-IT1-201ENST00000439185 VGLL3A8MV65 326 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 H7C417 338 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 EIF4E2O60573 245 aaKnown RBP1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 IGLV3-25P01717 112 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ARG1P05089 322 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SERPINE2P07093 398 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CT45A6P0DMU7 189 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CT45A5P0DMU8 189 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CT45A7P0DMV0 189 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 U2AF2P26368 475 aaKnown RBP eCLIP1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 LOXP28300 417 aaPredicted RBP1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SLC1A1P43005 524 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 PRMT2P55345 433 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 MAJINQ3KP22 176 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CT45A1Q5HYN5 189 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 C9orf135Q5VTT2 229 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 NPSR1Q6W5P4 371 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 NKAIN4Q8IVV8 208 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 OR11H7Q8NGC8 314 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CT45A3Q8NHU0 189 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 RAB3IL1Q8TBN0 382 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ACMSDQ8TDX5 336 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 EEF1AKMT3Q96AZ1 226 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TPD52L3Q96J77 140 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 CENPKQ9BS16 269 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 GGTLC1Q9BX51 225 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SAMD10Q9BYL1 202 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 ANKRD60Q9BZ19 345 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 NEUROG2Q9H2A3 272 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 MTFP1Q9UDX5 166 aa1.62□□□□□ -2.15
UPP2-IT1-201ENST00000439185 SDK2Q58EX2 2172 aa1.61□□□□□ -2.15
UPP2-IT1-201ENST00000439185 TSPOAP1O95153 1857 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms