RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 A8MV72 311 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 TACSTD2P09758 323 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 IGHV4-31P0DP07 118 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZNF3P17036 446 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 MMP15P51511 669 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 CHN2P52757 468 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 TMEM33P57088 247 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 CCL8P80075 99 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 CRMP1Q14194 572 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 PITX2Q99697 317 aa21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 RBM4Q9BWF3 364 aaKnown RBP21.1■□□□□ 0.97
RAPGEF1-206ENST00000438647 TPD52L2O43399 206 aaKnown RBP21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 TIMM8AO60220 97 aaPredicted RBP21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 DEAF1O75398 565 aaPredicted RBP21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 DBHP09172 617 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 ANXA8P13928 327 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 PYCR1P32322 319 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 GGT2P36268 569 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 SLC25A1P53007 311 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 DBPQ10586 325 aaPredicted RBP21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 TMEM179BQ7Z7N9 219 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 LINC00346Q8IVM7 164 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 DIRC2Q96SL1 478 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 SAP30LQ9HAJ7 183 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 CMC2Q9NRP2 79 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 MRPL22Q9NWU5 206 aaKnown RBP21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZDHHC8Q9ULC8 765 aa21.09■□□□□ 0.97
RAPGEF1-206ENST00000438647 COL8A2P25067 703 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 FMO3P31513 532 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 GPR6P46095 362 aaPredicted RBP21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 ERFP50548 548 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 BLVRAP53004 296 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 PSG7Q13046 419 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 CFAP77Q6ZQR2 320 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 OR9Q1Q8NGQ5 310 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 HPS1Q92902 700 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 APOBEC3DQ96AK3 386 aaPredicted RBP21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 ATF6BQ99941 703 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 EGLN1Q9GZT9 426 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 STARD10Q9Y365 291 aa21.08■□□□□ 0.97
RAPGEF1-206ENST00000438647 SONP18583 2426 aaKnown RBP21.08■□□□□ 0.96
RAPGEF1-206ENST00000438647 SPRY3O43610 288 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 LILRA1O75019 489 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 ADH4P08319 380 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 GRK5P34947 590 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 TSTQ16762 297 aaKnown RBP21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 SLC27A4Q6P1M0 643 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 GTF3AQ92664 365 aaKnown RBP21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 PTP4A1Q93096 173 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 YIPF5Q969M3 257 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 SLCO4A1Q96BD0 722 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 NRBF2Q96F24 287 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 NMNAT2Q9BZQ4 307 aa21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 ZNF275Q9NSD4 429 aaPredicted RBP21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 PURGQ9UJV8 347 aaKnown RBP21.07■□□□□ 0.96
RAPGEF1-206ENST00000438647 YLPM1P49750 1951 aaKnown RBP21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 CRLF1O75462 422 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 IGHV1-46P01743 117 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 OSMP13725 252 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 ZNF16P17020 682 aaPredicted RBP21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 SPI1P17947 270 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 KITLGP21583 273 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 POU1F1P28069 291 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 CRYBB2P43320 205 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 TMEM255AQ5JRV8 349 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 ATG16L2Q8NAA4 619 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 OR51L1Q8NGJ5 315 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 DNAJC9Q8WXX5 260 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 ELMOD3Q96FG2 381 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 POFUT1Q9H488 388 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 COMMD3-BMI1R4GMX3 469 aa21.06■□□□□ 0.96
RAPGEF1-206ENST00000438647 IGHV1-69-2A0A0G2JMI3 117 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 LRP5LA4QPB2 252 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 TVP23AA6NH52 213 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 ZSCAN5BA6NJL1 495 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 PPIHO43447 177 aaKnown RBP21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 RP2O75695 350 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 RAC2P15153 192 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 PAICSP22234 425 aaKnown RBP21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 C1orf146Q5VVC0 180 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 SHQ1Q6PI26 577 aaKnown RBP21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 USP51Q70EK9 711 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 HS3ST5Q8IZT8 346 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 IQCF1Q8N6M8 205 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 OR6K6Q8NGW6 343 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 HAVCR1Q96D42 359 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 CMBLQ96DG6 245 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 TEX12Q9BXU0 123 aa21.05■□□□□ 0.96
RAPGEF1-206ENST00000438647 F5H5K5 113 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 CDC14BO60729 498 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 TIPRLO75663 272 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 GYPBP06028 91 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 TNFSF4P23510 183 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 ENTPD1P49961 510 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 TRIP10Q15642 601 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 HFEQ30201 348 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 KRTAP27-1Q3LI81 207 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 FAM166AQ6J272 317 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 FBXW12Q6X9E4 464 aa21.04■□□□□ 0.96
RAPGEF1-206ENST00000438647 ZNRF4Q8WWF5 429 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms