RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CACNG6Q9BXT2 260 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 MRPL37Q9BZE1 423 aaKnown RBP13.9□□□□□ -0.18
SNRPB-202ENST00000438552 BCL2L14Q9BZR8 327 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 C8orf4Q9NR00 106 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 H2AFY2Q9P0M6 372 aaPredicted RBP13.9□□□□□ -0.18
SNRPB-202ENST00000438552 EIF3KQ9UBQ5 218 aaKnown RBP13.9□□□□□ -0.18
SNRPB-202ENST00000438552 ITGB1BP2Q9UKP3 347 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 KLHDC2Q9Y2U9 406 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 ARFGEF3Q5TH69 2177 aa13.9□□□□□ -0.18
SNRPB-202ENST00000438552 LOC100130705A0A1B0GUX0 176 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 SLC22A31A6NKX4 558 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 ICMTO60725 284 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 RAD52P43351 418 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 RSPO1Q2MKA7 263 aaPredicted RBP13.89□□□□□ -0.19
SNRPB-202ENST00000438552 MST1LQ2TV78 715 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 KRTAP27-1Q3LI81 207 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 SLC16A9Q7RTY1 509 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 OTOSQ8NHW6 89 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 NRG4Q8WWG1 115 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
SNRPB-202ENST00000438552 PERPQ96FX8 193 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
SNRPB-202ENST00000438552 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 POFUT1Q9H488 388 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 PLK3Q9H4B4 646 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 CXorf56Q9H5V9 222 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 CENPMQ9NSP4 180 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 DDX28Q9NUL7 540 aaKnown RBP13.89□□□□□ -0.19
SNRPB-202ENST00000438552 BEX4Q9NWD9 120 aaPredicted RBP13.89□□□□□ -0.19
SNRPB-202ENST00000438552 MYEF2Q9P2K5 600 aaKnown RBP13.89□□□□□ -0.19
SNRPB-202ENST00000438552 AASSQ9UDR5 926 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 CCDC168Q8NDH2 2452 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 OTOGQ6ZRI0 2925 aa13.89□□□□□ -0.19
SNRPB-202ENST00000438552 F5H5K5 113 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 OVOL3O00110 214 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 APOL3O95236 402 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ACSM4P0C7M7 580 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 HTR1FP30939 366 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 PTH2RP49190 550 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 HCCSP53701 268 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 PPP1CBP62140 327 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 SNRPD2P62316 118 aaKnown RBP13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ECH1Q13011 328 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 EFNB3Q15768 340 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ARL9Q6T311 187 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ENTHD1Q8IYW4 607 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 RFLNBQ8N5W9 214 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF555Q8NEP9 628 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 SLC25A40Q8TBP6 338 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 CYGBQ8WWM9 190 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 DCLRE1CQ96SD1 692 aaKnown RBP13.88□□□□□ -0.19
SNRPB-202ENST00000438552 TTTY10Q9BZA0 68 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 OR2J1Q9GZK6 312 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ELOVL3Q9HB03 270 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 ADGRL4Q9HBW9 690 aa13.88□□□□□ -0.19
SNRPB-202ENST00000438552 TMEM129A0AVI4 362 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 B9A039 149 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 M0R135 149 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 SLC16A6O15403 523 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 ENTPD6O75354 484 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 CLIC3O95833 236 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 CLPTM1O96005 669 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 LYNP07948 512 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 MPV17P39210 176 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 ART1P52961 327 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 SNRPGP62308 76 aaKnown RBP13.87□□□□□ -0.19
SNRPB-202ENST00000438552 MAD2L1BPQ15013 274 aaPredicted RBP13.87□□□□□ -0.19
SNRPB-202ENST00000438552 TAF13Q15543 124 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 OR51G2Q8NGK0 314 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 RNF133Q8WVZ7 376 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 TRUB1Q8WWH5 349 aaKnown RBP13.87□□□□□ -0.19
SNRPB-202ENST00000438552 IPCEF1Q8WWN9 437 aaPredicted RBP13.87□□□□□ -0.19
SNRPB-202ENST00000438552 SPTSSAQ969W0 71 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF799Q96GE5 643 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 YIPF3Q9GZM5 350 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 VCXQ9H320 206 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
SNRPB-202ENST00000438552 DUSP13Q9UII6 198 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 LAMP5Q9UJQ1 280 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 COPS3Q9UNS2 423 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 STARD10Q9Y365 291 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 USF3Q68DE3 2245 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 MYO9AB2RTY4 2548 aa13.87□□□□□ -0.19
SNRPB-202ENST00000438552 A0A1W2PPW3 197 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 VSTM5A8MXK1 200 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 NDUFS7O75251 213 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 ZNF250P15622 560 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 GABRB1P18505 474 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 ANOS1P23352 680 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 OTX1P32242 354 aaPredicted RBP13.86□□□□□ -0.19
SNRPB-202ENST00000438552 SLC6A9P48067 706 aa13.86□□□□□ -0.19
SNRPB-202ENST00000438552 RGS6P49758 472 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms