RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SFXN2Q96NB2 322 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 PBOV1Q9GZY1 135 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 TAS2R4Q9NYW5 299 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 ASH2LQ9UBL3 628 aa22.76■■□□□ 1.23
CPNE1-216ENST00000437340 LINC01387J3KSC0 135 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 SMAD9O15198 467 aaKnown RBP22.75■■□□□ 1.23
CPNE1-216ENST00000437340 TTRP02766 147 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 ITGA5P08648 1049 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 ACSM4P0C7M7 580 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 ENPP1P22413 925 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 HSD11B1P28845 292 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 DDOSTP39656 456 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 SRP9P49458 86 aaKnown RBP22.75■■□□□ 1.23
CPNE1-216ENST00000437340 FOXO1Q12778 655 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 PRSS45Q7RTY3 260 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 SIAH3Q8IW03 269 aa22.75■■□□□ 1.23
CPNE1-216ENST00000437340 P2RY10O00398 339 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 CDK2P24941 298 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 BTCP35070 178 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 CARD18P57730 90 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 BTG1P62324 171 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 AIMP2Q13155 320 aaKnown RBP22.74■■□□□ 1.23
CPNE1-216ENST00000437340 KLF9Q13886 244 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-216ENST00000437340 SERPINA12Q8IW75 414 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 ZIC4Q8N9L1 334 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 ADGRG7Q96K78 797 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 FAM173AQ9BQD7 235 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 UTP23Q9BRU9 249 aaKnown RBP22.74■■□□□ 1.23
CPNE1-216ENST00000437340 DPAGT1Q9H3H5 408 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 NELFAQ9H3P2 528 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 COPZ2Q9P299 210 aa22.74■■□□□ 1.23
CPNE1-216ENST00000437340 FOXD3Q9UJU5 478 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-216ENST00000437340 INMT-MINDY4F8WBC2 141 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 NEURL1O76050 574 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 MSR1P21757 451 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 GDNFP39905 211 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 TAF13Q15543 124 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 NKAIN3Q8N8D7 197 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 FAM3DQ96BQ1 224 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 PNRC2Q9NPJ4 139 aaKnown RBP22.73■■□□□ 1.23
CPNE1-216ENST00000437340 ZNF275Q9NSD4 429 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-216ENST00000437340 DDX28Q9NUL7 540 aaKnown RBP22.73■■□□□ 1.23
CPNE1-216ENST00000437340 ZNF221Q9UK13 617 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 RBMX2Q9Y388 322 aaKnown RBP22.73■■□□□ 1.23
CPNE1-216ENST00000437340 LOC100289279A0A1B0GTE1 492 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 XRCC3O43542 346 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 ECDO95905 644 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-216ENST00000437340 GDF1P27539 372 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 GRB2P62993 217 aaKnown RBP22.73■■□□□ 1.23
CPNE1-216ENST00000437340 SPINK14Q6IE38 97 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 ANKRD16Q6P6B7 361 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 OR51D1Q8NGF3 324 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 OR2V1Q8NHB1 315 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 SLC7A6Q92536 515 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 DLL3Q9NYJ7 618 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 RCE1Q9Y256 329 aa22.73■■□□□ 1.23
CPNE1-216ENST00000437340 DOCK10Q96BY6 2186 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 PINLYPA6NC86 204 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 DHHO43323 396 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 TRAPPC6AO75865 159 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 KRT33AO76009 404 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 WDPCPO95876 746 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 POU3F4P49335 361 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 AP3S2P59780 193 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 RNASE12Q5GAN4 147 aaKnown RBP22.72■■□□□ 1.23
CPNE1-216ENST00000437340 C20orf196Q8IYI0 205 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 ZBTB8BQ8NAP8 495 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-216ENST00000437340 PLPP7Q8NBV4 271 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 OR6M1Q8NGM8 313 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 FCAMRQ8WWV6 532 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 AUNIPQ9H7T9 357 aa22.72■■□□□ 1.23
CPNE1-216ENST00000437340 ACOT7O00154 380 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 CDK2AP1O14519 115 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 RER1O15258 196 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 SYT7O43581 403 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 GLSO94925 669 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-216ENST00000437340 ITGA3P26006 1051 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 GFRA1P56159 465 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 TAS2R20P59543 309 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 C2orf76Q3KRA6 126 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 WIPI1Q5MNZ9 446 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-216ENST00000437340 PHYHD1Q5SRE7 291 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 UBASH3BQ8TF42 649 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 SLC25A28Q96A46 364 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 FOXRED1Q96CU9 486 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-216ENST00000437340 FER1L6-AS2Q96M78 137 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 ZNF416Q9BWM5 594 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 PTPRZ1P23471 2315 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-216ENST00000437340 LOC390937A0A1W2PQ73 354 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 GFRA3O60609 400 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 POU3F2P20265 443 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-216ENST00000437340 CTSSP25774 331 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 HTR2CP28335 458 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 CAPZA1P52907 286 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 SGCAQ16586 387 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 DNM1P46Q6ZS02 220 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 LUZP2Q86TE4 346 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 OR2M7Q8NG81 312 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 OR52I2Q8NH67 350 aa22.71■■□□□ 1.23
CPNE1-216ENST00000437340 ST6GAL2Q96JF0 529 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms