RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 SERPINB9P50453 376 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 APOC4P55056 127 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 RWDD2BP57060 319 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 FBXW4P57775 412 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTBP60709 375 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ATP6V0D1P61421 351 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTA2P62736 377 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 VSNL1P62760 191 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTG1P63261 375 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTG2P63267 376 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTC1P68032 377 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTA1P68133 377 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 MRPS22P82650 360 aaKnown RBP3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 TGFBR3Q03167 851 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZNF33AQ06730 810 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 TSC22D1Q15714 1073 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 MOGQ16653 247 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 GPRC6AQ5T6X5 926 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 SETD3Q86TU7 594 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 TMEM135Q86UB9 458 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 FUNDC1Q8IVP5 155 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 LIX1Q8N485 282 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR2L8Q8NGY9 312 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR2G2Q8NGZ5 317 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 TEX47Q8TBZ9 253 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 MYDGFQ969H8 173 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 CPNE4Q96A23 557 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 CCDC126Q96EE4 140 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ITCHQ96J02 903 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ZFP3Q96NJ6 502 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ATP5SQ99766 215 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ECSITQ9BQ95 431 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 NRIP2Q9BQI9 281 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 UCK2Q9BZX2 261 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 SYT4Q9H2B2 425 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 SIAEQ9HAT2 523 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 C8orf4Q9NR00 106 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 SIRT7Q9NRC8 400 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 ABCB10Q9NRK6 738 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 NUFIP1Q9UHK0 495 aaKnown RBP3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 RAB23Q9ULC3 237 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 MMP17Q9ULZ9 603 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 V9GYY9 64 aa3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 PHF3Q92576 2039 aaKnown RBP3.29□□□□□ -1.88
HMGB1P45-201ENST00000435986 JCADQ9P266 1359 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 RAD50Q92878 1312 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 F8VP50 259 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 GFYI3L273 518 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 PRMT5O14744 637 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 CYTH3O43739 400 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 SC5DO75845 299 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 KLF8O95600 359 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 RAB3DO95716 219 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 IL6P05231 212 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 KRT16P08779 473 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 CTXN2P0C2S0 81 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 NPR2P20594 1047 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 IVDP26440 423 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 HLA-DMAP28067 261 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 FOXN2P32314 431 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 NSG1P42857 185 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 MAGEA6P43360 314 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 VDAC2P45880 294 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 TUFMP49411 452 aaKnown RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 UBE2KP61086 200 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 MED21Q13503 144 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 CAPRIN1Q14444 709 aaKnown RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR4D1Q15615 310 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 SGCAQ16586 387 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 PPM1LQ5SGD2 360 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR2G6Q5TZ20 316 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 H2AFVQ71UI9 128 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 IQCKQ8N0W5 287 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 CCDC54Q8NEL0 328 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR1N2Q8NGR9 330 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR9G1Q8NH87 305 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 C7orf33Q8WU49 177 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 PHYHIPLQ96FC7 376 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 PPP1R36Q96LQ0 422 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR8B4Q96RC9 309 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 TIMM29Q9BSF4 260 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 RIOK2Q9BVS4 552 aaKnown RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 HES7Q9BYE0 225 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 ACTR3CQ9C0K3 210 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 C20orf85Q9H1P6 137 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 OR51M1Q9H341 326 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 THSD7BQ9C0I4 1608 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 ARHGAP23Q9P227 1491 aa3.28□□□□□ -1.88
HMGB1P45-201ENST00000435986 ANKRD30AQ9BXX3 1397 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 CDHR2Q9BYE9 1310 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 IGKV1D-8A0A087WSZ0 117 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 TRIM49D1C9J1S8 452 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 E5RI56 91 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 PGRMC1O00264 195 aaKnown RBP3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 CCL21O00585 134 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 ADAP1O75689 374 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 TSPAN13O95857 204 aa3.27□□□□□ -1.89
HMGB1P45-201ENST00000435986 ACTL6AO96019 429 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms